Rissa tridactyla (black-legged kittiwake): 128903911
Help
Entry
128903911 CDS
T09443
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03083
Polycomb repressive complex
rtd04980
Cobalamin transport and metabolism
rtd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128903911 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128903911 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128903911 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128903911 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128903911 (HCFC1)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128903911 (HCFC1)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128903911 (HCFC1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
128903911 (HCFC1)
HMT complexes
COMPASS/SET1 complex
128903911 (HCFC1)
MLL-HCF complex
128903911 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128903911 (HCFC1)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128903911 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Motif
Other DBs
NCBI-GeneID:
128903911
NCBI-ProteinID:
XP_054043772
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
RPPAPARVQLVRANTTSLEVSWGPVPTADSYLLQLQKYEIPAAASPAPAPVPSVPANPPK
SPAPAAAAPPGPPPGPPGLGRPRGPHPAAAPAPRRPRRWALTPTPPPHTVSPPGVPAVLK
VTGPPAATAGPPLVTVRSAGTPGKAPVTGDVPPGGVRMVVPSQSPQGTVIGSSPQMSGMA
ALAAAAAATQKIPPASAPTVLSVPAGATIVKTVAVSPGTTTLPATVKVASSPVMVSNPAT
RMLKTAAAQVGTAGTATPATNAATRPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVK
SPISVPGGSALISNLGKVMSVVQTKPVQSSAVTGQASSGPVTQIIQTKGPLPAGTILKLV
TSGEGKPTTILTTTQAGAGGAKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQAGATG
VTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKLATGHGQQGVTQVVLKGAPGQPGTI
LRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSASRL
AGPPITTLGTIATLSSQVLNPAAITVSAAQTTMTAAGGLPTPTITMQPVSQPTQVTLITT
PSGVEAQPVHDLPVSILASPTGDQPAATAPLPEPAQPEGGAPGTVTLVCSNPPCETHETG
TTNTPTTSLVANVGGXGLQLVCEGSEAGAGVVRVCSNPPCETHETGTTNTATAGLARPPG
PCPTQQTAATGTTMTPRLCREPPPGRPLPKPAGHRRPLAGHRRPPRGGEDAAVPNPPPAV
GVPRRPRGEPGRGGNRRGRRGHETLSNPPCETHETGTTHTVTSVVQALCQPPPRDGDRRR
GHRGHGHETLLQPPPARPARRGTAGAATAAAATRPCSNPPCETHETGTTNTVTTASSRPC
ANPPCETHETGTTPTATTTVATGTRPCSNPPCETHETGTTNTATTATAGTSGGPPAGXPP
PCQTHQTAATATTMTPAQGGAPPRGTPXRACSNPPCETHETGTTHTATTVTSAMGANQEP
PPAANGQGEPEPPPPGEGVPPSPAGTPSPPGPGGGTGAPPRRPWGGRGGARRPPPALVVT
GLTPEELAVTAAAEAAAQAAASEEXQALAIQAVLQAASRPSWASCPPPPTAWPPPAPSWP
PPPPVVAPSPAKLQAATALAEVAALAEVANGIETAPVKPDPVAQPPKALAKKENQWFDVG
VIKGTTMMVTHYFLPPDDGAPPPDEAGGVPDHAGLRRQELQPGTAYKFRVAGLNAAGAGP
SPTSPPSRPCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGRIVEYSVYLAIQGGXGGA
EAKGPPAQLAFMRVYCGPSPSCLVASGSLSSAHIDYTTKPAIIFRIAARNEKGYGPATQV
RWLQESSKDGSWAKPASKRPLSSPDM
NT seq
4223 nt
NT seq
+upstream
nt +downstream
nt
agcggccgccggcgccggcgcgggtgcagctggtgcgcgccaacaccacgtcgctggagg
tgagctgggggccggtgcccacggccgactcctacctgctgcagctgcagaagtacgaga
tccccgccgccgcctcccccgcgcccgcccccgtgccctccgtccccgccaaccccccca
agagccccgcgcccgccgccgccgccccccccggccccccccccggccccccaggccttg
gccgcccccgtgggcctcaccctgctgccgcccccgccccccgccgcccccgccggtggg
cgctgacccccaccccccccccccacaccgtgtcccccccaggcgtcccggcggtgctga
aggtgacgggtccccccgcggccacggcggggccccccctggtgacggtgcgctcggccg
ggacccccggtaaagccccggtgacgggtgacgtccctcccggcggcgtccgcatggtgg
tgcccagccagagcccccagggcacggtgatcggcagcagcccccagatgagcggcatgg
cggcgctggcagcggcggccgccgccacccagaagatccccccggcctcggcccccaccg
tgctgagcgtccccgccggggccaccatcgtcaagacggtggccgtgtcccccggcacca
ccacgctgccggccaccgtcaaggtggcctcgtcccccgtcatggtgagcaacccggcca
cccgcatgctgaagacggcggcggcgcaggtggggacggcggggacggccacccccgcca
ccaacgcggccacccgccccatcatcaccgtccacaagtcggggacggtgacggtggccc
agcaggcccaggtgatgaccaccgtggtggggggcgtcaccaagaccatcaccctggtca
agagccccatctccgtcccggggggcagcgccctgatctccaacctggggaaggtgatgt
cggtggtgcagaccaagcccgtgcagagctcggccgtcaccgggcaggcgtcctccggcc
ccgtcacccagatcatccagacgaagggcccgctgccggcggggacgatcctgaagctgg
tgacgtcgggggaggggaagcccaccaccatcctgacgacgacgcaggcgggggcggggg
gggccaagcccaccatcctgggcatcagcagcgtctcccccagcaccaccaaacccggca
ccaccaccatcatcaaaaccatccccatgtccgccatcatcacccaggcgggggccaccg
gcgtgaccagcagccccggcatcaagtcgcccatcaccatcatcaccaccaaggtcatga
cctcgggcacgggcgcccccgccaagatcatcaccgccgtccccaagctggccaccggcc
acggccagcagggcgtcacgcaggtggtccttaagggagcccccgggcagccgggcacca
tcctgcgcaccgtccccatggggggcgtccgcctcgtcacccccgtcaccgtctccgccg
tcaagcccaccgtcaccaccctggtggtcaagggcaccacgggcgtgaccacgctgggga
cggtgacggggacggtgtccaccagcctggcgggggcgggtggccacagcgccagccgcc
tcgctggcccccccatcaccacgctgggcaccatcgccacgctctccagccaggtcctca
acccggccgccatcaccgtctcggccgcccagaccaccatgacagccgccggcgggctgc
ccacccccaccatcaccatgcagcccgtgtcccagcccacgcaggtgacgctgatcacga
cgcccagcggggtggaggcccagcccgtccacgacctgcccgtctccatcctggcctccc
ccaccggcgaccagccggcggccaccgcccccctccccgagccggcccagcccgagggag
gcgcccccggcaccgtcaccctggtctgctccaaccccccctgcgagacccacgagacgg
gcaccaccaacacccccaccaccagcctggtggccaacgtgggcgggnnggggctacagc
tggtctgcgagggctcggaagccggggccggggtggtccgcgtctgctccaaccccccct
gcgagacccacgagacggggaccaccaacacggccaccgccggcctggcccggcccccgg
ggccctgtcccacccagcagacggcggccaccggcaccaccatgacgccgcggctctgcc
gggagcccccccccggccgccccttgccaaagccagcaggccaccgccggcccctcgctg
gccaccgccggcccccgcggggaggagaagacgccgccgtgccaaacccaccccccgccg
tgggcgtcccccggcgtccccggggagagccaggacgggggggcaaccgccggggccgcc
gcggccacgagaccctgtccaaccccccctgcgagacccacgagacgggcacgacccaca
cggtgaccagcgtcgtccaggccctgtgccagccccccccacgagacggggaccgccgac
gcggccaccgcggccacgggcacgagaccctgctccaacccccccctgcgagacccgcga
gacgggggacggccggcgcggccaccgccgctgcggccacgagaccctgctccaaccccc
cgtgtgagacccacgagacggggaccaccaacacggtgaccaccgcgtcgtccaggccct
gtgccaaccccccctgcgagacccacgagacggggacgacccccacggccaccaccaccg
tggccacgggcacgagaccctgctccaaccccccctgcgagacccacgagacggggacca
ccaacacggccaccacggccacggcggggacgagcggggggccaccagcagggnctcccc
ccccctgccagacccaccagacggcggccaccgccaccaccatgacgccggcccaggggg
gcgcccccccacgagggacccccnnccgcgcctgctccaaccccccctgcgagacccacg
agacggggacgacccacacggccaccaccgtcacctcggccatgggcgccaaccaagagc
cccccccggctgccaacggtcagggggagcccgagccgccccccccgggggaaggggtgc
ccccctcccccgccggcacccccagcccccccggccccggaggcggcaccggcgcccccc
cgaggcgcccctgggggggccgggggggggcgcggcggccccccccggccctggtggtga
cggggctgacccccgaggagctggcggtgacggcggcggccgaggcggcggcccaggcgg
cggccagcgaggagngccaggcgctggccatccaggccgtgctgcaggcggccagcaggc
cgtcatgggcctcctgcccccccccgccgacggcttggccccctccagcgccttcgtggc
cccccccgccgcccgtggtggcccccagccccgccaagctgcaggcggccaccgctttgg
ccgaggtggccgctttggccgaggtggccaacggcatcgagacggccccggtgaagccgg
acccggtggcccagccgcccaaggcgctggccaagaaggagaaccagtggttcgacgtgg
gcgtcatcaagggcaccaccatgatggtgacgcactacttcctcccgcccgacgacggcg
cccccccccccgacgaggccgggggggtcccggaccacgcggggctgcggcggcaggagc
tgcagccgggcacggcctacaagttccgggtggccgggctgaacgctgcgggcgcgggcc
cttctccgacctctccgccttcaagaccctgcctgcccggcttccccggcgccccctgcg
ccatcaagatcagcaagagcccggacggggcgcacctgacgtgggagccgccctcggtga
cgtcggggcgcatcgtggagtactcggtgtacctggccatccaggggggcncgggggggg
cggaggccaagggcccccccgcgcagctggccttcatgcgggtctactgcgggcccagcc
cctcctgcctggtggcctcgggcagcctctccagcgcccacatcgactacaccaccaaac
ccgccatcatcttccgcatcgccgcccgcaacgagaagggctacggccccgccacccagg
tgcggtggctgcaagagtccagcaaagacggatcctgggccaaacccgccagcaagcggc
cgctctcctcccccgacatgtga
DBGET
integrated database retrieval system
