Rissa tridactyla (black-legged kittiwake): 128904295
Help
Entry
128904295 CDS
T09443
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04514
Cell adhesion molecule (CAM) interaction
rtd04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128904295 (CNTN1)
04517 IgSF CAM signaling
128904295 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128904295 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtd00537
]
128904295 (CNTN1)
Cell adhesion molecules [BR:
rtd04515
]
Immunoglobulin superfamily
Contactins
128904295 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtd00537
]
Others
128904295 (CNTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
F22D3_4_N
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Interfer-bind
Tissue_fac
Ig_ANOS1
DUF4998
Big_3_4
NDNF
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
128904295
NCBI-ProteinID:
XP_054044384
LinkDB
All DBs
Position
1:complement(187509623..187769575)
Genome browser
AA seq
1023 aa
AA seq
DB search
MLALQGTIPFEIMLEQKITMWLFIYHLITPCFVFGLAEEGNKGYGPVFEEQPIDTIYPEE
SSDGQVSMNCRARAIPFPTYRWKLNNWDIDLTKERYSMVGGRLVINNPEKSRDAGKYVCV
VSNIFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN
EFPVFIPLDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSRFIPLIPQSDR
AKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLK
IFNIQYEDEGLYECEAQNYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWPCVATG
KPIPTIRWLKNGASFRKGELRMQSLTFDDAGMYQCIAENAHGIIYANAELKIVASPPTFE
LNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINITK
LDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDL
TFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASA
DLVVRGPPGPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDP
SDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGG
GGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMPP
STQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVSDKS
VEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSRTI
DIITRKAPPSQRPRIISSVRSGSRYIITWDHVQAKSNESAVEGYKVLYRPDGQHEGKLFS
TGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAAGVPTLLLVLVVPALGVLAC
SGF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgttgcaaggcacaattccttttgagataatgctcgagcagaagataaccatg
tggctcttcatctatcatcttattacaccctgtttcgtcttcggcctggcagaggaagga
aacaaaggttatggacctgtttttgaggagcaacccattgataccatctacccagaagaa
tcttcagatggacaagtttcaatgaactgcagggctcgagcaattccttttcctacttac
aggtggaaactcaacaactgggatattgatttaacaaaggagcgctacagtatggtggga
ggcagacttgttatcaataatccagagaaatcaagggatgctggaaaatatgtctgtgta
gtgtcgaatatctttgggactgtcagaagcagtgaagccactctgagttttggatacctg
gatccctttccacctgaggagcgctatgaggttaaagtgcgagagggtgttggagcagtg
cttctttgtgagcccccttaccactacccagatgatctcagttatcgctggcttctaaat
gagttcccagtattcattcctttggacaaacgacgatttgtgtcacagacaaacggcaat
ctctacattgcaaatgtagaagcatcagataagggcaattattcgtgttttgtgtccagc
ccttcaataacaaagagtgtattcagtagatttattccccttattccacagtctgatcgt
gcaaaagtatatcctgccgacatcaaggtgaagttcaaggacacatatgctctcctgggg
caaaacgtgacgctggagtgttttgctcttgggaatccggttcctgaactcagatggagt
aaataccttgaacccatgccagccactgctgagataagcatgtctggtgcagttcttaag
atcttcaatattcagtatgaagatgaaggactttatgagtgtgaagcacaaaactataaa
ggaaaagataaacatcaagcaagagtttatgtacaagcctctcctgagtgggtagaacat
atcaatgacacagagaaggatataggcagtgacctatattggccttgtgtagctacaggc
aagcctattccaacaattagatggttgaaaaatggtgcctcgttccggaaaggtgaactt
agaatgcaaagtctgacctttgatgatgccggcatgtaccaatgtatagcagaaaacgca
catggaattatttatgcaaatgctgaactgaagattgtggcttcacctcctacttttgaa
ctgaaccctatgaagaagaaaatcctagcagctaaagggggccgggtgatcattgaatgc
aagcctaaagctgctcctaagccaaaattctcctggagcaaaggaacagaattgcttgta
aatgggagccgcatacgtatctgggatgatgggagcctggaaattatcaatatcacaaag
ctggatgaaggtcgctatacctgttttgcagaaaataaccgaggaaaagctaatagcact
ggtgttctagaaatgacagaagctacaaggattactttagctccgttgaatgttgatgtc
accgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagacctg
acatttatttggtctctaaatggctttgtaatagattttgagaaagagcacgaacattat
gaaaggaatgttatgattaaatccaatggagagctgcttattaaaaacgttcagctgcgg
catgcggggaggtacacctgcactgctcagacgattgtcgacaactcctcggcttcagct
gaccttgtggtgagaggtcctccaggaccacctggaggtataagagtagaagaaattaga
gacactgctgtagcacttacctggagtcgtggaacagacaatcatagccctatttctaaa
tacactatccagtcaaaaacttttctgtctgaagagtggaaagatgccaaaacagatcca
tcagatattgaaggaaatatggaatctgctacagtgattgatttaattccatggatggaa
tatgagttccggataatagcaacaaacactctggggacaggagaacctagtatgccatca
caaagaattagaactgaaggagctcctcctaacgtggctccttctgatgtcggaggaggg
ggtggaagcaatcgagagctgacgataacgtggatgcctttgtcaagagaataccactat
ggcaataactttggttatatagtggctttcaagccatttggtgagaaagaatggagaaga
gttacagttactaatcctgagattggccggtatgtccacaaggatgaatcgatgccacct
tcaacccagtaccaagtaaaagtgaaagcttttaacaacaaaggggatggaccgttcagt
ctcactgctgtcatttattcagcacaagatgctccaactgaaatacctacagatgtgagc
gtcaaagttttgtcatcttctgaaatgtctgtttcttggcaccatgtttctgataaatct
gtggaaggatatcagattcgttactgggctgctcatgataaagaagcagctgcacagcgg
gtacaagtgagcaatcaagaatattcaaccaaactggaaaacctgaagcctaatactcgt
taccatgtagatgtttctgccttcaatagtgcaggctatgggcctcccagcagaaccatc
gatattattaccaggaaagcacctccaagccaacgtccaagaattatcagttctgtaaga
tctggttcaaggtacatcatcacctgggatcacgtgcaggcaaagtcaaatgagtctgca
gttgaaggatacaaagtactgtatagaccagatggacaacatgaaggcaagttgttttca
actggaaaacacacaatagaggtcccagttcccagtgacggtgaatatgttgttgaggtc
cgagcacacagtgaaggaggagatggagaagtagctcaaataaaaatttcaggtgccgct
gctggagtaccgactctgctcctggtcctggtggtgcctgccctgggtgtcctcgcctgc
tcgggattctga
DBGET
integrated database retrieval system
