Rissa tridactyla (black-legged kittiwake): 128904303
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Entry
128904303 CDS
T09443
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128904303 (PARPBP)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128904303 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
128904303 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Transposase_23
Motif
Other DBs
NCBI-GeneID:
128904303
NCBI-ProteinID:
XP_054044394
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All DBs
Position
1:157967153..158017846
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AA seq
582 aa
AA seq
DB search
MIAFQQQILNLIKCFRRQWPLFSNSERTTICGADCMLMALQLSMAEVNKQQHGDFTVSLS
DVLETWKYLLHDKLGLSYENMKEPENYVNLKKAYHAFLSRSNMLDLIDVCQKCYCLGLVS
EDESITPVRLLEFISGIMNVQENNGSVLSTPSTPVNRLGQENVKVTILAKKCVCSYLSLL
VNSKDDLALAHILNVPDRGLGREAFTNLKHASQERKMSIFLMATSFIRTVELGGRGCASS
LFDPLKAHVKGLSNFVNFIDKLQEIVGEILDPRVAGGRILSTMKMHLIKGRSNGDPFCQA
VEEVVQDLDLKIKNIIDSQHEVSTASTTGVSPARPKLHSINHGTVYCGRDTVKVLLALLD
EEAVSPPTQNKAELLYDDESLNLFGITSVLTLFRSPAQSNGSSPKPLRQRIQKSMDEKKM
KMRQSSIKSQFACTYKNELSEIKGQHFLSSNQITTCIHPAPKQHLKAGYLTEGMNSCLDV
PVLGTISENVHQTRSYTEMGKLSCQPRNKDSKNEQMDLNNDKVICDKESEPSLQKIAKRP
KTSNNPQEELDSKISGKRQHSKTASKNKLIAGQAKLTDFFRL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattgctttccagcaacaaattttaaacttgatcaagtgtttcagaagacaatggcct
ttattttcaaactctgaaagaactactatctgtggagcagactgcatgctgatggcgtta
caactgtcaatggcagaagtcaataaacagcaacatggagatttcacagtatcacttagt
gatgtgttggaaacttggaaatatttgttacatgacaaactgggattatcatatgaaaac
atgaaagaacctgaaaattatgttaacctaaaaaaagcctatcatgccttcttatcaaga
agcaatatgttagatctaatagacgtatgtcagaagtgctattgtcttggacttgtatct
gaagatgagagcataacccctgtccgactgttggaatttatttctggcataatgaatgta
caagaaaataatggttctgttctttctactccatctacaccagtcaacagactgggccag
gagaatgtgaaggtgacaatcctggcaaagaagtgtgtttgttcgtatttaagcctgttg
gtgaattctaaggatgatctcgcgttggctcacattctaaacgttcctgacagaggactt
ggtagagaagccttcactaatctaaaacatgcctcacaggagagaaaaatgtccattttc
ctgatggcaacatcttttatccgaactgtagaacttggaggaagaggctgtgcatcttca
ttgtttgatcctttaaaagcccacgtaaagggtctttcaaactttgttaattttattgac
aagctgcaagaaattgttggtgaaatcttagatccaagagtcgcaggggggcgaattctg
tcaacaatgaagatgcatttgataaaaggccgaagcaatggggatcctttctgtcaggca
gtagaggaagttgtacaagacttggatttgaagattaaaaatattatcgattcacaacat
gaagtctcgactgccagcactactggagtcagtccagcacggccaaaattacattccata
aatcatggcactgtctattgtggcagagatactgtaaaggtcttactagctcttctggat
gaagaagctgtcagtcctcctacccagaacaaagcagaactattatacgatgatgaaagc
ttaaatctgtttggaatcacctctgttttgacgctcttcagatctccagcacaatccaat
ggatcttctccaaaacctcttagacaacgtattcagaaatccatggatgaaaaaaaaatg
aagatgaggcaatcttcaatcaaatctcagtttgcatgtacatataaaaatgagctgagt
gaaattaagggtcagcatttcctcagcagtaaccaaatcacaacctgcatacatcctgca
ccaaagcaacatttaaaagctggatatctcacagaaggtatgaattcatgtcttgatgta
ccagtgcttggaactatttctgaaaatgttcaccagactagaagttatacagaaatggga
aagctgagttgtcagccaagaaacaaggactccaagaatgaacagatggatttgaataat
gacaaagtaatctgtgataaggaaagtgaaccatctttgcaaaaaatcgctaaaagacct
aagacttcaaacaaccctcaggaggaactggacagcaaaatcagtggaaaaagacaacac
agcaaaactgcaagcaagaataagttgattgctggtcaggcaaaattaactgactttttt
cgactataa
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