Rissa tridactyla (black-legged kittiwake): 128904383
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Entry
128904383 CDS
T09443
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
128904383
NCBI-ProteinID:
XP_054044581
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Position
1:126242552..126337885
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AA seq
738 aa
AA seq
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MAMLLFPVQLLAVAVTIYLELVRSTQGGVYYGIKQLPPQVPQYQPLGQQVPHIPLGKEGI
PMQHMGKEVPHMQYGKEYPHLPQYMKEVPQMPLLGKDMAPKKEKEMPIRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EVGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGAPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
MQGPPGLPGVGKPGQDGVPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGAPGLRGLPGPTGPKGEAGQKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGLPGPPGFPGVGKPGVAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPSVGQYLPEVGPIDGVKPPYGYKGKKG
KAGAAVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGIYYFAYH
VHCKGASVWVALFKNNEPLMYTYDEYKKGFLDQASGSAVVPLMHGDKVYVQMPSEQAAGL
YAGQYVHSSFSGYLLYPM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgctcttccctgtgcagctgctggcagtggctgtgaccatttacctagag
ctggtgaggtctactcaaggtggcgtctactatgggatcaagcagctgccaccccaggtg
ccccagtaccagcccctcggacaacaagtacctcacataccgctgggcaaagaaggcatc
ccgatgcagcacatgggcaaggaggtgccgcacatgcagtacgggaaagagtacccccat
ctgcctcagtacatgaaggaggtcccgcagatgcctctactcggcaaggacatggctccc
aagaaagaaaaagaaatgcccatacgcagtctgaggggcgagcaaggtccccctggtgag
cctggaccacgagggccgccagggccaccaggattaccaggtcacggcgtgccaggagcc
aaaggaaaaccaggcccgcaaggatatccaggaattgggaagccgggtttgccagggatg
ccggggaaaccgggcgtcatggggcccccagggccgagaggggagatggggccgaagggg
gaggttgggcccatggggatacccgggccacaaggaccgccggggcctcacggccttcct
ggcattgggaaagcaggtgctccagggctgcagggacagccgggaccaaagggtgagccc
gggatgaaggggcccccaggagcccccgggatcccagggccaaaaggggagaagggcgtc
gggatcccgggtttgccggggctgaagggaccgcccgggctgccgggtccccccggcccc
gtggggctgccaggggtcggcaagccaggcatggttggcttccccggcccacagggaccc
ctaggcaaacccggacccccaggagagctggggctgcaggggcccccgggggcccctgga
atgcagggccctcccggcctgcctggcgttggcaaacccggccaggacggcgtccccggc
cagccgggcttcccaggtggcaaaggggagcaaggcctgccaggcctgccggggcctccc
ggcctccccggggttgggaagccaggtttccccgggcccaagggtgagcgtggggtgggt
ggtctgcccgggcccctggggccgaagggggagaagggccacgctgggccgccaggcatg
ggggggccgccaggggagccaggccagccgggattgccgggcatcatgggccccccaggt
gccgccggcttcccgggacccaaaggagaaggtggtgccgtggggccgccaggaccagtt
ggccccaaaggggaacctggcctgcagggtttcccagggaagccaggattccccggggaa
gtgggggcacccgggctgcgggggctgccgggtcccacagggcccaagggggaagctggg
cagaagggcttgcccgggctgccgggtgtcccagggctggtggggccgaagggggagccg
gggctccctggcgcccaggggcttcagggcccctcgggcatcccaggcatcgcaggaccc
agcggtcccatcggacccccggggctgccaggggcaaagggggagcccggcctgcccgga
ccccccggcttccctggcgtgggcaaacccggtgtggcggggctgcagggacccccaggg
aagccaggggcgctcggtccccctggccagccgggactccaggggccgcctggcccccct
gggcccccaggtcccccagtcatcatcccacccactccgccatctgtgggacagtacctg
cccgaggtggggccaatagacggcgtcaagcccccctatggctacaagggcaagaaaggc
aaggctggtgccgccgtctacgagatgcctgcgttcacggcggagctcctcacccccttc
ccccgggtcggggtgcccgtgaaatttgacaagctcctctacaacggccggcagaactac
aacccccagacgggaatcttcacctgcgagatccccggcatctactacttcgcctaccac
gtccactgtaaaggggccagcgtctgggtggcgttgttcaagaacaacgagccgctgatg
tacacctacgacgagtacaagaagggcttcctggaccaggcttcaggcagtgccgttgtc
ccgctgatgcatggagacaaggtttacgttcaaatgccatccgagcaggcggcaggactc
tatgccgggcagtacgttcattcgtctttttcaggatatttattgtatcccatgtaa
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