Rissa tridactyla (black-legged kittiwake): 128904422
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Entry
128904422 CDS
T09443
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128904422 (DDX17)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128904422 (DDX17)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128904422 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128904422
NCBI-ProteinID:
XP_054044715
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All DBs
Position
1:complement(162953810..162974234)
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AA seq
655 aa
AA seq
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MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcgt
ggaggtcctcttcctccaaagaaattcggtaatccgggggaacgtttacgtaagaaaaaa
tgggatttaaatgaactgcccaagtttgagaagaatttttacgtggaacatccggaagtg
gccaggcttactccgtatgaagttgaagagttgcgaagaaagaaagagataacaattcga
ggaatggagggctgccccaagcctgtgtttgccttccaccagtgtagctttccgcagtat
gtgatggatgccttgatggaccagaacttcacagaacccactccaattcagtgccaaggc
tttccactagccctcagtggtcgtgatatggtgggcattgcacagaccggctctgggaag
acactagcatacttgttgcctgcaattgttcacatcaaccaccagccatatttggagaga
ggagatggcccaatttgtctggttctagcacctacgagagagttggcccagcaagtgcag
caggtggctgatgattatggcaaatgttcaagactgaagagtacctgcatatatggagga
gcacccaaaggtccccagatcagagatctagaaagaggtgtggagatctgcattgctaca
ccaggtcgcttgattgacttcctcgaggcaggaaaaaccaaccttcgacggtgtacgtac
ctggtgctggatgaagcagacaggatgttggacatgggatttgaaccccaaattcgtaaa
attgtggaccagataaggcctgacagacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgccgaggacttcctgcaggactatgttcagatcaatgtgggaaac
ttagagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgag
aaagaccacaaactgatacaactgatggaagaaatcatggcagagaaggagaacaagact
atcatctttgtggagacaaagaggagatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagatgtggaagatgttaaatttgtgataaactacgactatccgaacagctctgaagat
tatgtccaccgtattggccgtaccgcacgtagtaccaacaaaggtactgcctacaccttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggaggaggtggtggt
ggaggaggtcgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcgggtggc
ttcagagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttccgcagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtatccgccccctcccccgccccctcccccctcacgcaaatga
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