Rissa tridactyla (black-legged kittiwake): 128904440
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Entry
128904440 CDS
T09443
Name
(RefSeq) C-type lectin domain family 4 member E-like isoform X1
KO
K10059
C-type lectin domain family 4 member E
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128904440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtd04054
]
128904440
04091 Lectins [BR:
rtd04091
]
128904440
Pattern recognition receptors [BR:
rtd04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
128904440
Lectins [BR:
rtd04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
128904440
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Motif
Other DBs
NCBI-GeneID:
128904440
NCBI-ProteinID:
XP_054044748
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All DBs
Position
1:142633935..142644968
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AA seq
221 aa
AA seq
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MNRRGRVSPGTAAPAEERSCSWLNPWVFLVSVLAIKTAFVIICLVVFLHGSSGQYKILLQ
NATEWRCVPNVSASKKGWMCCPNGWKCFQKSCYYLSTDKMSWAESVQNCTGMGSQLVVIN
SKAEQEFIFNLAKGVFANAYEKKYYIGLSAYESGQWQWVDQTPYKKSATFWKPGEPNLLF
AEKCAGIHIKGKTDPNTYSNWNNILCFTSCYRICELAVKFV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccgagggagagtcagccctggaactgcagccccagcagaagagagaagctgc
tcctggctgaacccctgggtcttccttgtttctgtccttgccatcaaaactgcctttgta
atcatctgcctcgtagttttccttcatggaagctctggccagtacaagattctgctccag
aatgccacagaatggcgctgcgtccccaacgtatctgcaagcaaaaagggctggatgtgc
tgcccaaatggctggaaatgctttcaaaaaagctgctattatctgtcgactgataaaatg
tcctgggctgagagtgtgcagaactgcactgggatgggctcccagctggtggtgatcaac
agcaaagcagagcaggaatttatcttcaacttggcgaaaggagtgtttgctaacgcctat
gaaaaaaaatactacataggcttaagtgcttatgaaagtgggcagtggcagtgggtggat
cagactccatataagaagtcagccacgttctggaaacctggtgaacccaatttactcttt
gcagaaaaatgtgctggaattcacatcaagggaaaaacagacccgaacacttacagtaac
tggaacaacatcctttgctttacaagttgctatcgaatttgtgaactggcagtcaaattt
gtctga
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