Rissa tridactyla (black-legged kittiwake): 128904508
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Entry
128904508 CDS
T09443
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128904508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128904508
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128904508
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
128904508
NCBI-ProteinID:
XP_054044929
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Position
1:76765087..76830313
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AA seq
1204 aa
AA seq
DB search
MIAEPNAASNLPSQKENAVHDETVPESAVQNGSCVRNGNLKTPREKRKVREQCENVRRNS
SSSRRVSQLQNGEVVEAVTLFEVVSMGKQAMQSVVDDWVEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLQKNDVMQKMTENFDEETGLQYKKFVAYPWILTVTWPVDMDNEDYP
LIRTGPYWKKFKANFCEFIAVLVQQCQCSILYDSYLMDTIISLLTGLADSMVRAFRHTST
LAAMKLLTAVVSVYLNLDVNKHNAQRLYEVEKKRISGKRTNYRLDQLERKRKEYEHKLLE
IQNMMNAIFKGTFLNRYRDVIPEIRATCIEEIGSWIKTYPDAFLNDSYLKYIGWMLYDKQ
AEVRLKCLLGLQGIYSRKELVSRMDLFTGRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDALSAEDCETLYQFVYTTHRPLAVAAGEFLYKRLLSHEGDEEVQPKGGGKFGASTDHL
KRLIRFFLESELHKHVAYLIDSLWDWAGKFLKDWECMTALLLKNAEEDGEELSDAHESVL
IEIILATVREAAEGHPPVGRGAAKKILSVKEKKIQLEDCTKITEHFIMVLPQLLAKYSTD
AQKVANLLQIPQYYDLDVYSTGHLEKHLDALLREVKDIVTKHSDISVLEASSRTYYVLCS
EEIAIYSQVDCARTQLIDELMGQLNQLLDGFWQKEEGFCTDAGEISRMHSALRRVAAFHN
AHNLTKWNLYDKTLRLLVFETEHGSLPVLMILPALQCTYFSLLWQLAAISENPPKETLFA
LGRELRRFCQICMCFLHHKEKDVREKAFMILCDWLLILSHQDSNNNEEAVGLLNYLPSTP
LQEKLLLFIQEHVFMEEEDESKDLTEEEERQDESCKLDDLHKKRSLLAAYCKLIVYNVVE
MTAAAEIYKHYVKTYNDFGDIIKETLSRTRHNNKIQSAKTLILCLQQLFQRHAESQDSSS
GVDFSSASFTNMKELARRFSLTFGWDQVKSRESVAMIHKEGIEFAFQGATGVDGKCLPPN
LSFLLIISEFSNKLLKPDKRLVYAYLQRYIAEPLPCRGDEWQPLIWYRNSLLANEDEESS
VLGGSGEWSPMGTPKMSSFKRKLSNGSLPDTSQTEAASKAPALQRASQLASATGKSRKRL
KSREMHLQEHLPFLCPGGLRRRYCKDEIKTEDVSEEGQAEDVIEDVDVDVVGADQVIPAR
VFEL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagcccaacgcagccagtaaccttcccagccaaaaagagaatgctgtccat
gatgagactgtgcctgagtctgctgtgcagaatggcagctgtgtgagaaatggcaacctg
aaaacaccaagagagaaacggaaggttcgagaacagtgtgaaaacgtaaggagaaattct
tccagtagcagaagagtgagccagctgcagaatggcgaagtggttgaggcagttacgttg
tttgaagtggttagcatggggaagcaggccatgcagtctgtagtagatgactgggttgaa
gcttataaacaagacaggaatgtggcgcttttagatctgatcaacttcttcattcagtgc
tcaggctgccaaggcatggtaacagcagagatgtttcaaagtttgcagaagaatgatgtc
atgcaaaaaatgacagagaacttcgatgaggaaactgggttgcagtataagaaattcgtg
gcctatccttggatcctgacagttacttggccggtggatatggacaatgaagactacccg
ctgatcagaacaggaccctattggaagaagttcaaggccaacttctgtgaattcattgca
gtgcttgtccaacagtgccagtgcagcatcctatatgatagctacttgatggacactatt
atctcgctccttacaggcttagcggactccatggtcagagcatttagacacacgagcact
ttagcagcaatgaaacttctgacagcagttgtaagcgtatatctgaaccttgatgtcaac
aagcacaatgctcaaagattatacgaggtggagaagaagaggataagtggcaagaggacc
aattacagacttgaccaactagagagaaaaaggaaagagtatgagcataagcttctggag
atacagaacatgatgaatgctattttcaaagggacgtttctaaaccgttaccgtgatgtg
atccccgagatccgagcaacttgcattgaagaaattggcagctggattaaaacataccca
gatgcttttttaaatgatagctacttaaaatacattgggtggatgctgtatgataagcaa
gctgaagtgcggttgaagtgtcttctgggactgcagggaatttatagcagaaaagaactt
gtttccaggatggatctctttactggcagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgcgttatcagctgaagactgtgaaacgttataccagtttgtttataccaca
caccgtccgcttgcagtagcagctggggaattcctttataaaaggctgcttagtcatgag
ggagatgaagaagttcagcccaaaggaggagggaagtttggtgcgagtactgaccatttg
aaaagattaatacgttttttcctggagagcgagctacacaaacatgtcgcatacctcata
gacagcttgtgggactgggcaggcaaattcctgaaggactgggagtgcatgactgctctt
ctattaaaaaatgctgaagaagatggagaagaactgagtgatgcccatgaaagtgttctc
attgaaattatcctcgcaacggttagagaagcagctgaaggtcatccaccagtgggcaga
ggtgcagccaaaaaaattctgtcagtaaaagagaagaaaatacaattggaagattgtacg
aaaattactgaacactttattatggtgcttcctcagctcttggcaaagtattcaacagat
gcacaaaaagtggcaaatcttctgcagattcctcaatattatgatttggatgtttacagt
acgggacatctagagaagcatttggatgctttactgagagaggtaaaagacattgtgacc
aaacactctgacatatctgtccttgaggcttcctccaggacttattatgtcctctgcagt
gaagaaattgccatctacagccaggtggattgtgcccgaactcaactgatagatgagttg
atgggacagcttaaccagctactagatggcttctggcaaaaggaagaaggattttgtacg
gatgcaggagaaatttcccggatgcactctgctttgagaagagtagcagcttttcataat
gcccataatctcaccaagtggaatctgtatgacaagactttaaggttgctggtgtttgaa
acggaacatgggagtttgcctgttttgatgatcctgccagctctccagtgcacatatttt
tctctcctgtggcaactagctgcaatttcagaaaatcctcccaaggagactctttttgca
ctaggaagagagctgagacgtttctgtcagatttgcatgtgcttcctccaccataaggaa
aaagatgtaagagaaaaggcattcatgatactctgtgactggttgctgattttgagtcat
caggattcaaataataatgaagaagcagtcggacttctaaattatcttcctagcacgcca
cttcaggaaaaactgcttttgtttatccaggaacatgttttcatggaggaagaagatgaa
agcaaagacctgacagaagaggaggagagacaggatgaaagttgcaaacttgacgacttg
cacaaaaagcggagtcttcttgcagcatattgcaagttaatagtgtataatgtggtagag
atgactgcggctgctgagatctataagcattatgtgaagacctacaatgattttggagac
ataattaaagaaacgttaagcaggaccaggcacaataacaaaattcagagtgccaagacg
ctgattctctgtctgcagcagctgtttcagagacatgcagaaagccaagacagcagtagt
ggcgtggacttctcctctgcttccttcacaaatatgaaagaacttgcccgtcgcttttca
ctaacatttggctgggaccaggtgaaatctagagaatctgtagctatgatacacaaggaa
gggattgaatttgcttttcaaggggctactggagtagacggaaaatgcttgcctcctaac
ttgagctttctgttaatcatcagtgaattttccaacaagctgctaaagcctgacaaaaga
ctagtgtacgcttacttacagaggtacatagcagaaccactgccttgcagaggtgacgaa
tggcagccgttgatttggtacagaaactctttactggcaaatgaagatgaagagagctct
gtcctcggtggttcaggagagtggtcccccatgggcacacctaagatgtcttcttttaaa
aggaagttgtctaatgggtctttgcctgacaccagccagacggaggcagcaagcaaagct
ccagccctgcagcgggcttcccagcttgcctctgctactgggaaaagcagaaagaggcta
aaatctcgagagatgcatttgcaggaacacttgccgttcctttgtccaggagggctgcgg
agaagatactgcaaagatgagattaagacagaagatgtctcagaggagggtcaagcagaa
gatgtaattgaagatgtcgatgttgatgtggttggtgcagaccaggtaattccggctcgg
gttttcgagctctga
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