Rissa tridactyla (black-legged kittiwake): 128904647
Help
Entry
128904647 CDS
T09443
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128904647 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128904647 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128904647 (NUP98)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128904647 (NUP98)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128904647 (NUP98)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128904647 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128904647
NCBI-ProteinID:
XP_054045279
LinkDB
All DBs
Position
1:complement(11635550..11673446)
Genome browser
AA seq
1900 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FFGNTNTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGVG
GSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGANTAGNSLF
GNKPATGTLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFG
APQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQSAGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKKL
VLKNLNSSNLFSPVNRENEDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEDDQHEVT
RFYTNPIAKPIPQTPENAVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASFHDDSLQDE
REEEPETVHHLHPAGIVLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFE
GEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIK
SPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSK
VDTKKLKTTPVLPPGHLPPQQMTLNGKPPPPSQSPEVEQLGRVVELDSDMADITQEPLQE
PVVEDNMIEEPEAVPASTHIASTLGINPHVLQIMKASLLADEDDLDLILDHHPGKQPAKM
DTSQEICSPRLPISKSQGQKRYSVGGLLQSKFANIIFQPPSAAQQDFKGPRTLSSPPSAA
LWSATSPLASAFSVPSSVPEVQMKTVGVRRQQGLVPLEKSITYRKGKLLMDMALFMGRSF
RVGWGPNWTLVNCGDQLSGSTEIEELQCESVEYGFLPTPVAPKSLSESSFKVRVEKLSLE
QRKMDRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRKASEDPAVTE
TVVKHWGLTWTLCEAIWGNLKELEASLEEPSEYTLALERRKAFSRWLSETAAGRIEEEVS
LSRHGNHIEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWH
RLQADCFIQEERLRIFALLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYLLPPTASVS
KALAMYESAFQNTPECEKYACCPLPPYLEDSGCVIEEDDNAGRPLRDVCFHLLKLYSDRC
YELDQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLFRQGQGVLNASYAAQLESEGLWE
WAVFVLLHEPDTHVREKAVRELINRHCVLSETPESWAKETFLTQRLCVPPEWIHEAKAVR
ARMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALI
QDWEMAGLVYLDYIRVIEMLDRIQQAPANRIWCISENAEGFGRCCQKKMWALPCKRALCS
MAMRGVKEKEQNQQLAAGLFHLRAGAVTHQSDVAVQEDRADPVPQRKGPPGSVRYGQAHR
QPAAGGPQPAARPGARLRLHAGPAACPSSPARSPRRAALYARGLCLGGAPQPHPVLPSGA
DSSDSLRKNLFHGWDSFYRLLTLTLVLRVNNLSLATQGFP
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccgtttggaggcagcactggctttgggacaacttca
acttttggacaaaatgccggctttggtactacaagtggaggagcgtttggaacatcagcc
tttgggtcaaacaataatactggaggcctctttgggagtacgcagacaaaaccaggagga
ttgtttggttcgactacgtttaatcagccagccacctcctccacaagcactggctttggg
tttggaacctcgactgggacatcaaatagcctgtttggaactaccagcactggtgggggc
ctcttctcatcccagaataatgcctttgcgcagaataagccagctgggtttggaaacttt
ggaactagtaccagcagtggaggtctctttggaaccactaacactacttccaatcctttt
ggaagtacctctggctctctttttggcccaactagttttactgccgctccaactggcaca
actattaaatttaatccaccaaccggtacagatactatggtaaaatctggagtcagcact
aacatcaataccaagcaccaatgtatcacagctatgaaagaatatgaaagcaaatctctc
gaggagctccgtttagaagactaccaggcaaataggaaagggccctcgaatcctgtggga
gcaggagcagcagcaggcttgtttgggtcttcaacggctacgtcaagtacagccacagga
ctgtttggctcttctactactaacactggcttttcatacggacagaataaaactgctttt
ggaaccagtacgactggctttggaacaggcacaacaggggggctttttggtcagcaatct
caaactaccagtctgtttaataaaccatttggtcaagccacaacgacgcagaacactggc
ttttttgggaataccaatactctagggcagccgaacaccagcacaatgggtctctttggg
gtaacccagccctcgcagcccggaggcctttttggaacagctgccaatacaaatgctggt
actggatttggaaccggaactggtctttttggacaagctaacacaggatttggtgttggc
ggttcgaccctgtttggtaacaagcctgctggatttggaaccaccacgaccagtgctccc
tcgtttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggtgccaacactgctggaaatagtttgttt
ggaaataagccagcaactgggactctgggaactggacttggaacagggtttggaacggct
ctcggggcaggacagacatctttatttggaaacacccagcctaaacttggtggaacacta
ggaacgggagcatttggagcaccaggattcaatacatcaacagctactctgggctttgga
gctccacagcctgctgtagctctgacagacccaaatgcatcggctgcccagcaagccgtc
cttcagcagcatctcaatagcttgacttactcaccctttggagattctccgctcttcaga
aaccccatgtcagacccaaagaagaaagaagagaggctgaaaccaactaacccagcagct
cagaaggccttaacgacacccacccactacaagctgactccgcgtccagcgaccagagtg
cgaccgaaagctttgcagtcagctggctctgcgaaatcccatctctttgatggtcttgat
gatgacgagccatccctatccaatggtgcattcatgccaaagaagagcatcaaaaagttg
gttttgaagaatctcaacagtagcaatctgttctcacctgttaatcgtgaaaatgaagac
ctggcgtccccatcagagtatccagagaatggagatcggttctttttgtcggtacctccc
gatgaaaaccacaggcaagatggtgagcgggaggaggaggatgatcagcatgaagtgact
cggttttacactaaccccattgccaagcccatcccacagaccccagagaatgctgtgcac
aaacaccagaacagtgtggatgacactattgtggctctgaatatgcgtgtggccttgcga
aatggtctggaaggcagcagtgaagatgcctcgtttcatgatgattcccttcaggatgag
cgcgaagaggagcctgaaacagtgcatcatctgcatcctgcaggaattgttctcacgcga
gctggctattacaccatcccctccatggaggagctagcgcgattcaccaatgacaggaat
gaatgtattgtgacagacttcaccataggccgcaaaggttatggatcgatttactttgaa
ggagaagtaaatctaactaacttaaatctggatgacattgtacatatccgtagaaaagaa
gttattgtttaccctgacgatgaaagaaaaccacctattggtgaaggtttaaatagacga
gctgaagttaccttagatggagtctggcctacagataaaacatctcgttgcctgataaaa
agccctgaacgcctggcagagatgaattacgaaggcagactggagtccgtctcccggaag
cagggcgctcgattcaaggaataccgcccagagaccggatcttgggtgtttaaggtggca
cacttctccaagtatggcttgcaagattcagatgaggaagaggaggagcatccttcaaaa
gtggacacaaagaagttaaaaacaacacctgtgctgcccccagggcacctgccgccccag
caaatgaccctaaacggcaagccaccacctccatcccagagcccagaagtggagcagctg
ggcagggttgtggaactggacagtgatatggcagacatcacccaggagcctctccaggag
cccgtggtggaggataacatgatagaagagcctgaggcagtgcctgcttcgactcacatc
gcctcaaccctgggtattaacccccacgtcttgcagattatgaaagcttccttgcttgcc
gatgaagatgacctagatttgatcctggatcatcatcctgggaagcaacctgcaaaaatg
gatacttctcaagagatctgttctccgaggctcccaatttcaaaatcacaaggacagaaa
agatactcagttggtgggctgctgcagtcaaaatttgctaacataattttccagccacca
agtgctgctcagcaagatttcaagggaccgaggactttgagcagtcccccttctgctgcc
ctttggtcggcgacttctccgttagcgtctgcattctctgtgccatcatcagtccctgag
gtacagatgaaaacagttggtgtccgcaggcagcaagggcttgtacctctggagaagtcc
atcacctacagaaaagggaagctgctgatggatatggccctcttcatgggacgctcgttc
cgcgttggttggggacccaactggacacttgtcaattgtggagatcagttgagtggatca
actgaaatagaagagcttcagtgtgagtctgtggaatacggattcctgccaactcctgtt
gctccaaaatcactctcagaatcctctttcaaggttcgcgtggagaagctgagcttagag
cagcggaagatggacagagacaaacagctgtatctcatccccctggagataaagctgaaa
cacagcactgtccatatggatgagcagtgtcctctgctggcgcccaacccgggagtttct
gctattcacgactatgctgactgggttaggaaggcatccgaggatcctgctgtgacagaa
actgttgtgaagcactggggcttgacgtggactttatgtgaagcgatttgggggaacttg
aaggagttggaggccagcttggaggaacccagtgaatacaccctcgccctggagcgcagg
aaagccttctctcgctggctctcggagaccgctgcgggacgaattgaggaggaagtctct
ctgtcccgacacggcaatcacatagaggctgtcttcagctgccttactgggaagagaatt
ggtgaagcttgcaggctggcgcagcagtcaggcgaccacaggctggctctgctgttgtcc
cagctggccggcagccagcccgtccgggacctcctcaccatgcagctggtggactggcac
aggctgcaggcggactgcttcatccaggaggagaggttgcggatctttgccctgcttgca
ggaaagcctgtgtggcagttatcggagagaataagtatcaatgtgtgctccctgctggac
tggaagcgttgcatggccgtccacctctggtacctgcttcctccaacagcttctgtgtcc
aaggcgcttgccatgtacgagtcagcgtttcagaacacaccagagtgtgaaaaatacgcc
tgctgtcctctgcctccttacctagaagattctggctgtgtaattgaagaagacgataat
gcaggaagacctctgagagacgtctgtttccatttgttaaagctctacagtgacaggtgt
tatgagcttgaccagctgctggatcccaggagtataacatctgaccctctggactaccgt
ctcagttggcacctgtgggaagtgctcagagccctgaattacacccacctcttcaggcag
ggccagggagtgctgaacgccagctacgctgcccagctcgaaagcgaagggctctgggaa
tgggctgtttttgtgctgctgcatgagcctgacacgcacgtacgggagaaggcagtgcgg
gagctcatcaaccgccactgtgttctctccgagacacccgagtcttgggccaaggagact
tttctgacgcagaggctctgcgtccccccagagtggattcatgaagcaaaggcagttcga
gcaaggatggagggcgacaagcacaaagaagccctcttcttgttcaaggctgggcactgg
aaccagtgtcacaagctggttgtcaggcacttagcatcagatgctattattaatgaaaac
tacaagtacctaaaaggattcctggaagatcttgcccctcccgagcgtagtgcactcatc
caggactgggagatggcggggctggtctacctggattacatccgcgttattgagatgctc
gatcggattcaacaggcaccagcgaacagaatatggtgcatctctgaaaacgcagaggga
tttggtagatgctgtcaaaagaagatgtgggctctgccctgcaaacgtgctctatgcagc
atggcgatgagaggagtgaaagagaaggagcaaaaccagcagttagctgctggattgttc
cacctacgagctggagcggttacacaccaaagtgacgtcgctgtgcaagaggatagagca
gatccagtgccacaacgcaaaggaccacctggctcagtcagatatggccaagcgcatcgc
caacctgctgcgggtggtcctcagcctgcagcacgccccggagcccgtctccgactccac
gccggacctgcagcgtgtccctcttcgcctgctcgctccccacgtcgggcggctctctat
gcccgaggactatgccttggaggagctccgcagcctcacccagtcttaccttcgggagct
gacagtagtgactcattgaggaagaatctcttccacggttgggacagtttttaccgtttg
ttaacccttacccttgttctgagggtgaacaacctctctctagccacgcaggggtttcca
tag
DBGET
integrated database retrieval system
