KEGG   Rissa tridactyla (black-legged kittiwake): 128904667
Entry
128904667         CDS       T09443                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rtd01009]
    128904667 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtd03036]
    128904667 (KDM5A)
Enzymes [BR:rtd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     128904667 (KDM5A)
Protein phosphatases and associated proteins [BR:rtd01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128904667 (KDM5A)
Chromosome and associated proteins [BR:rtd03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128904667 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 128904667
NCBI-ProteinID: XP_054045298
LinkDB
Position
1:152611844..152662783
AA seq 1692 aa
MSGGGGSRYAAEFVPPPECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPP
FACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDLYGL
SKIVASKGGFEVVTKEKKWSKVASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
IQKPNLDLKEKVEAEDLGSDAQASPKQASRMNVVLKRTRRVKSQVETGEMSRNTELKKLQ
IFGAGPKMMGLALGAKDKEDEVTRRRKGTRSEAFGMQMRQRKGTLSVNFVDLYVCLFCGR
GNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREY
TLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSG
FPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAHINADISGMKVPWLYVGMCFSSFC
WHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVMKELAPELFESQPDLLHQLVTIMN
PNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSH
YRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLMIEEETRLRESVVQMGVLMS
EEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPMQKKCLRYRYP
LEDLPSLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLF
RRLRDAVKEAETCASVAQLLLSKKQKHSRQSQDSGRTRTKLTMEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMMDEIPDSSKLQELIDMGSGLYVELPELPRLKQELQQ
ARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEAIQNGSNYAYL
EQLESLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYSLLQVLSPRTDI
GVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGLEEARDAAAVVAIFKEREQKEIEA
MHALRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHSGCVPLPKTSSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSA
FNRVIGSVSSSPRQTLDYDDEETDSDEDIRETYGYDIKDNASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEDLMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSMDEKPLKMRGRD
SSERKRKRKLERAEQFFGDMKQKSKDLKKLEKPKKKKLKLTMDKTKELNKLAKKLAKEEE
RKKKREKAVVAKVELAKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKPIQGPSSPAHAPPPPFLLS
YKLPMEDLKETS
NT seq 5079 nt   +upstreamnt  +downstreamnt
atgtcggggggtggcgggtcgcgctatgcggccgagttcgtccccccgcccgagtgccct
gtgttcgagcccagctgggaggagttcagcgacccactcggcttcatcggccgcattcgc
ggcctggcagagaaaaccggcatctgcaagatccggccccccaaggactggcagcctcca
tttgcgtgtgaagtacaaagttttcgtttcactccacgaattcagcgcctgaatgaactg
gaggcaatgacaagagttaagctggacttcttggatcagttagcaaaattctgggaactc
caaggatccaatttaaaaatccctgtggtggagagaaaaatactggatctctatggtctg
agcaagattgttgccagcaaaggaggctttgaagtagtcactaaagagaagaaatggtct
aaagtggcaagtcggcttggctacctgccaggaaaaggcacagggtcattactcaagtct
cattatgaacggatcttatacccctatgagctcttccagtctggggtcagccttatgggc
atccaaaaaccaaacttggaccttaaagaaaaagtggaggctgaggacctcggctcagat
gcccaggcttccccaaagcaggcttcaagaatgaacgttgtgctgaagagaaccaggcgt
gtcaaatcccaggtggagacaggagaaatgagtagaaatactgaactgaagaagctgcag
atctttggagctggacccaagatgatgggactggcactgggagcaaaggataaagaggat
gaggttacacgaagacgcaagggaaccagatcagaagcatttggaatgcagatgaggcaa
cgcaaaggaactctttccgtcaactttgttgatctgtatgtttgcttattctgtggcaga
ggaaataatgaggacaaactgctactgtgtgatggatgtgatgacagctatcacactttt
tgcttgattcctcctttacctgatgtacccaagggtgactggaggtgtccgaagtgtgtt
gctgaggaatgcaacaaaccccgtgaggcctttggatttgaacaagctgtcagggaatat
actctccagagctttggtgaaatggctgacaacttcaagtctgattatttcaacatgccg
gtccatatggttcccactgagcttgtagaaaaagaattttggcgactggtgagtagcata
gaagaagatgtcattgtggaatatggggctgatatatcatccaaggactttggaagtggc
ttcccagtgaaggatggccgacgaaagctgatgccagaggaggaggattatgcgctttct
ggttggaacttgaataacatgccaattctagaacagtcagtccttgctcacatcaatgca
gatatctctggcatgaaggttccttggctgtatgtagggatgtgcttctcctccttttgc
tggcatattgaggatcactggagctattccatcaactacctgcactggggagagccgaag
acgtggtatggtgtgccctctcatgcagcagagcagctagaggatgtgatgaaggaattg
gctcctgagctatttgaatcccagcctgatctcctgcatcagctggtcactattatgaac
ccaaatgtgctgatggaacatggtgtaccagtgtacaggaccaatcagtgtgctggcgaa
tttgttgtgacctttcctcgtgcctatcactctggatttaaccagggatataactttgct
gaagctgtgaacttctgcactgctgactggcttcccattggacgtcagtgtgtgagtcat
taccgaaggctgggacgtcattgtgttttctcccatgaagagctgatcttcaaaatggcc
gcggatccagagtgcttggatgttgggctagccgccatggtctgcaaggagatgactcta
atgatagaggaagagacacggttaagggagtctgttgtgcagatgggagttttgatgtct
gaagaagaggtgtttgaactggttccagatgatgagcgtcagtgcacagcttgcagaacc
acgtgcttcttgtcagctcttacatgttcctgtaatcctgagcgtctggtgtgcttatac
catccatctgatttatgtccatgtcccatgcagaagaagtgtctaaggtaccggtaccca
ctagaagaccttccttctttgctatatggagtgaaagttagagcacagtcttatgacact
tgggtcagtagagttacagaggctctgtctgccaatctcaaccacaagaaagatgtgatt
gagctgcgagtaatgttggaggatgctgaagacaggaaatatccagagaatgatcttttc
cggaggctcagagatgctgtgaaagaagcagagacctgtgcttcagtagcacagctgctt
ctgagcaaaaagcaaaaacacagcagacagagccaagatagtggaaggacacggaccaag
ctaactatggaggagctcaaagcatttgtacagcagttgtttagcctgccctgtgttatc
agccaggcccgacaagtaaagaatctgcttgatgacgtggaagaatttcacgagcgtgct
caagaagctatgatggatgagatcccagactcttccaagctgcaggagttgatagacatg
ggctctggcctttatgtagaacttcctgaactgccaagattgaagcaagaactgcagcag
gcacggtggctggatgaggtgaggtccaccctcttggatccccagagggtcaccctagat
gtgatgaagaagctgattgactcgggcgtgggcttggcaccacaccacgctgtagagaaa
gccatggctgagctgcaggagctgcttactgtctcggagaggtgggaggagaaggccaag
gtctgcctgcaggccagaccacgccaaagtatgatggctctggagggcatcgtgaatgaa
gcaaagaacatccctgcttacctgcccaatgtgctggcactgaaagaagccctgcagcgg
gctagagactggacagccaaagtggaggccattcagaatggaagcaactatgcctacctg
gagcaactggagagcttgtctgccaaaggccgcccaatacccgtgcgtctggatgccctg
ccacagctggagtcacaggtagctgcagcacgtgcctggagagagcgcacgggaagaacc
ttcctgaagaagaactcgagctacagtttgttacaggttctgagccctcggactgatatt
ggtgtttatgggagcagtaagaataggcggaagagggcaaaggagttgatggagaaggaa
aaggagaaagatcttgacctggaatccctaagtgaactggaagatgggttggaggaggcc
agggatgctgcagctgtggtggctatattcaaggagagggaacagaaggagattgaagcc
atgcatgctctcagggcagccaacctggccaagatgactatggtggatcggatcgaagaa
gtcaaattctgtatctgccgcaaaacagctagtggattcatgctacagtgtgagctgtgc
aaagactggtttcatagtggctgcgtgccccttcccaaaacaagttctcagaagaagggc
tctagttggcaggccaaagaagtgaagtttctgtgtccactttgcatgcgttctcgaagg
ccacggcttgagacgatactgtctctgctggtgtccctgcagaagctgcctgtacggctg
ccagaaggggaggcattgcagtgcttgacagaacgtgccatgagttggcaggaccgagca
cggcaggctttggccactgatgagttgtcttctgctttggctaagctttctgtcctgagc
cagcgcatggtggagcaggcagcacgagagaaaacggagaaaataatcagtgcagagcta
cagaaagcagcagctaacccagacctgcagggacacttgactagtttccagcaatcggcc
tttaacagagtgatagggagtgtatcctcatccccgcggcagactttggattatgatgat
gaagagacagactctgatgaagatatcagggagacgtatggctacgacataaaggacaat
gccagtgtaaaatcttctagcagcttggagcccaatttgttttgcgatgaggaaatcccc
attaaatcagaggaagtggtgacacacatgtggactgctccctcattttgtgctgaacat
gcatattcgtctgcttctaaaagctgctctcaaggttctagcactccaaggaagcagcct
cggaagagtccactggtacctcgcagtttggagccccctgtattggagctgtcacccgga
gcaaaagcacagctagaagatctcatgatggtaggagatctactagaagtgtcattggat
gagactcagcacatctggcggattttacaggctactcatccaccttctgaggacaggttc
cttcatgtcatggaggatgacagcatggatgagaaaccattgaaaatgagagggagggac
tcttctgagaggaagcggaagcgaaagctggagagagcagagcagttctttggagatatg
aaacaaaaatctaaagatctgaaaaaactggaaaaacccaagaagaagaagctaaaactc
accatggataagacaaaggagctgaacaagctggcaaagaaactggctaaggaagaggag
cggaagaaaaagcgagagaaggcagttgtagcaaaggtggaactagcaaaggagagcaca
gagaaaaaaagagagaagaaggttctagatattccttctaagtatgactggtcaggagca
gaggagtcagatgacgagaacgctgtgtgtgctgcgcagaactgccagaggccctgcaag
gacaaagtagactgggtgcagtgtgacggtggctgtgatgagtggtttcatcaagtttgt
gttggtgtctctccagaaatggctgagaatgaggattacatctgtataaactgtgcaaag
aagccaatacaaggaccaagtagccctgctcatgcaccacctcctcctttcttattgagc
tacaaactaccaatggaagatcttaaggagacaagttag

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