Rissa tridactyla (black-legged kittiwake): 128904670
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Entry
128904670 CDS
T09443
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128904670 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128904670 (EXOSC8)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128904670 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128904670
NCBI-ProteinID:
XP_054045310
LinkDB
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Position
1:29633774..29645619
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AA seq
276 aa
AA seq
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MATAFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPAVDSANKGYIVPNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQVIA
KEDLCIANGKLAWVLYCDIICLDYDGNILDASTFALLAALKNVQLPSVTINQETGLSEVN
LKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDDEDRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKKLIDKVIKSIKPQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagctttcaaaacggtggaaccattggaatattacagaagatttttgaaagag
aactgtcgacccgatggaagggagttaggtgaattccgggcaactaccgtcaacataggt
tcaattacaactgcagatggttctgccctggtgaagttaggaaatactacggtgatttgt
ggagttaaagcggaacttgctgcacctgcggtagattctgctaataagggatatattgtt
ccaaatgtagaactgccatccctctgttcaacgaggtttcgctctggaccacctggtgaa
gaggctcaagcagcaagccagttcatcgcagatgtgattgaaaattcacaggtgatagcg
aaagaagatctatgtattgcaaatggcaagcttgcttgggtgttatactgtgatatcata
tgtctggactatgatggaaacattttggatgccagtacctttgctttgttagcagcatta
aaaaatgtacaattgccatcagttactataaatcaagaaactggtttatcagaagttaat
ttaaaacagaagaatcctttgattatcagaaagcatccggttgccacatcctttgctata
tttgatgataccttactcattgttgatccaactgctgaagaggaggacttagcaactgga
acagtaactattgtaactgatgacgaagacagactatgttctgtccataaaccaggtgga
agtcctcttacaggagccaagcttcaggactgtatcaccagagcaattacaaggcacaaa
gaagtaaagaagctgatagataaagtaataaaaagtataaagccccagtga
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