Rissa tridactyla (black-legged kittiwake): 128904849
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Entry
128904849 CDS
T09443
Symbol
PUF60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128904849 (PUF60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128904849 (PUF60)
Spliceosome [BR:
rtd03041
]
Complex A
U2 snRNP components
U2 related factors
128904849 (PUF60)
Complex B
128904849 (PUF60)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
128904849
NCBI-ProteinID:
XP_054045676
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Position
2:complement(312906..344860)
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AA seq
578 aa
AA seq
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MFIAPVHLNKAVFKVDGLSRKHQLLFTRVQSPLRWKMDKARHLSWGFLPSHQNSRKLSRK
FPKHTSQIHGLEPTVPWHLPNTYSHGKQAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMA
AVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMS
WDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEE
ARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQ
DAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAG
AAVLGTLATPGLVSPALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVTIPQVGVVN
PILASPPALGLMEVKKEKEEEEVFQESERPEMLSEQEHMSISGSSARHMVMQKLLRKQES
TVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSM
ASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttcatagcaccagtgcatttaaataaggcagtgttcaaggtggacggccttagcaga
aagcaccaactgcttttcaccagggtacagagtccattaagatggaaaatggacaaagca
cggcatctaagctggggcttcctcccctcacaccagaacagcaggaagctctccagaaag
tttccgaagcacacgtctcaaatccacggtttagagcctaccgttccctggcacctccca
aacacgtacagccatggaaagcaggcaaagaagtatgcgatggagcagagtatcaagagc
gtgctggtgaagcaaaccatcgcccaccagcaacagcagctcaccaaccttcagatggca
gcagtgacaatgggctttggagatcctctctcacctttacaatcgatggcagctcagagg
cagcgcgccctggccatcatgtgtcgtgtgtatgtgggctccatatactatgagctggga
gaagacaccattcgccaggcctttgccccttttggacctataaaaagcattgatatgtcc
tgggactctgttacgatgaaacacaagggttttgcttttgtggagtatgaggtgcctgaa
gctgctcagctggccttggagcagatgaattctgtcatgctggggggaagaaatataaag
gttgggagacccagtaatataggtcaggcgcaaccaattatagaccagctagcagaagag
gcacgggctttcaaccgcatctatgtggcatctgttcatcaagacctctccgatgacgac
atcaagagtgtgtttgaggcctttgggaagattaaatcctgcacgctagccagggatccc
acaacaggaaaacacaaaggctatggtttcattgaatatgagaaagcacagtcttctcaa
gatgctgtttcctccatgaacctctttgaccttgggggtcagtatctccgagttggtaaa
gccgtgactcctccaatgcctctcctgacaccagctacaccgggaggactgcctccggca
gcagccgttgctgcagcggctgctacagcaaagatcacagcacaggaagcagtggcagga
gctgcagttcttggcaccttggcaacccctgggctggtatctccagcactgactctggcc
cagcccttgggggcgttgccgcaggctgtaatggcagcacaggcaccgggagtcattaca
ggtgtaacccccgcccgacctcccattcctgtcaccattccacaagtgggagttgtgaat
ccgatcctggctagtcccccggcattgggcctgatggaggtcaaaaaggagaaggaagag
gaggaggtattccaggagtcagagaggccagagatgctgagcgaacaggagcacatgagc
atatctggcagcagcgcccgtcatatggtgatgcagaaactgcttcgtaaacaggagtcc
actgtgatggtgcttcgcaacatggtggatccaaaggacattgatgatgacctagaggga
gaggtgacagaagaatgcggcaaattcggggctgtaaacagggtcatcatctatcaggag
aagcaaggagaagaggaggatgctgagatcattgtcaagatctttgtggagttctccatg
gcctcagagactcacaaagccattcaggctctgaacgggcgctggtttgcaggaaggaag
gtggtagcagaggtgtatgaccaggagagatttgataacagtgacctgtcagcatga
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