Rissa tridactyla (black-legged kittiwake): 128904944
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Entry
128904944 CDS
T09443
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128904944 (TRIM71)
04121 Ubiquitin system [BR:
rtd04121
]
128904944 (TRIM71)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128904944 (TRIM71)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128904944 (TRIM71)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128904944 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
128904944
NCBI-ProteinID:
XP_054046000
LinkDB
All DBs
Position
2:122457063..122518927
Genome browser
AA seq
885 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGGGGGSSCGGPPRR
LHVLPCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLL
DVVVVAAAAEEQKNGRAAGAGPAAGSAAGGGGGGGNNRHHGRPPPPHRAAGSSPAAAASA
APSSTTSSSSSSGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRA
HQRVRLTKDHFIERFAAAGPGPAGGPAAPLALSPPYTTASPYNILSVFPDRASYCQHHDD
EVLHFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSI
EQAQAVAEQVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEK
LRQNLNKLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTP
PDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDM
ISAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSG
RSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKF
GTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYP
WDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVV
TDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFES
NGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcctccaactcctccacctcctcctcctcctcgcagacctccagc
tcctccggggggggcggcggcggtggcggcggctcctcctgcgggggcccgccgcggcgg
ctccacgtcctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcac
cccggcgcgggggacgccctcaagctgcgctgccccatctgcgaccagaaggtggtgatc
tcggagccctcgggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctg
gacgtcgtcgtcgtggccgccgccgccgaggagcagaagaacggccgagccgccggggcc
ggccccgccgccggctccgctgcgggaggaggaggcggcggtggtaacaaccgccaccac
ggccgcccgccgccgcctcaccgcgccgccggctcctcgcccgccgccgccgcctcggcc
gcgccctcctcgacgacgtcgtcctcctcctcctcgggcggcggctcggcggcgctcctg
ctgcggcggccccacagccggcagggcgagccccgctgcagctcctgcgacgagggcaac
gccgccagctcccgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcg
caccagcgcgtccgcctcaccaaggaccacttcatcgagcgcttcgccgccgccggaccc
ggcccggctggcggccccgccgcgccgctcgccctcagcccgccctataccaccgcctcg
ccctacaacatcctctccgtcttccccgaccgggccagctactgccagcaccacgacgac
gaggtactgcatttctactgtgatacctgttctgtccccatatgtcgggaatgtaccatg
ggacgacatgtgggtcacagctttatctacctccaagatgccctccaagattccaggact
ctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactgagtatt
gaacaggcccaggctgtggcagagcaggttgagatgaaggcgaaggtggtacagtctgaa
gttaaagcagtgactactagacataagaaagccttggaggagcgggagtgtgagctgctc
tggaaggtggaaaagattcgtcaagtcaaggctaagtcactctacttgcaagttgaaaag
ttacgtcagaacctaaataagctggacaacaccattagtgctgttcagcaggtcctggag
gagggtcgtaccatggatattcttctggctcgggaccgcatgctggctcaggtgcaggag
ctgaagaatgtgagaggccttctccagccacaggaagatgacaggatcatgttcactccc
cctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagtggggctttt
gctcctctgaccaaagccactggggaaggcctcaagcgtgcgctgcagggcaaagtggcc
tctttcacagtcataggttatgaccatgatggtgagcctcgcctttcaggtggtgacatg
atctctgcagtggtgatgggcccagatggaaacctttttggggcagacgtcagtgatcag
cagaatgggacctacctggtcagctaccgtccacaactagagggagagcacctggtatct
gtgatgatgtgcaaccaacacattgagaacagccccttcaaagttgtggtgaaatctggg
cgcagctacataggcattgggctgccaggactctcttttggcagcgagggagacagcgat
ggcaagctctgccgcccctggggggttagtgtagacaaagaaggctacatcattgttgct
gatcgcagtaataaccgcatccaggtgttcaaaccgtgcgggaccttccatcacaagttt
ggcacactggggtcccggcctggccagttcgatcgccctgctggtgtggcctgtgacgtc
tcgcgtaggatcgtggtggctgacaaggacaatcatcgcatccagatcttcacgtttgag
gggcagttcatcctgaagtttggggagaaaggaacaaagaacgggcaattcaattaccca
tgggatgtggccgtcaatgcagagggcaagatcctggtctctgacacaaggaaccatcgc
gttcagctgtttgggcctgatggtgtgtttcttaacaagtatggctttgaaggggcactc
tggaagcactttgattcccccagaggtgtgactttcaatcatgagggccacttggtcgtg
actgacttcaacaaccatcgccttctggtcatccatccagattgccagtcagcacgcttt
ctgggctcggaaggcaccgggaatggccagttcctgcgcccgcagggagtggcggtggat
caagaggggcgcatcatcgtggccgattccaggaaccaccgggtgcagatatttgagtca
aatggtagctttttatgcaagttcggcactcagggaagcggctttggtcagatggaccgt
ccttcaggtatagccgtcacccctgatggcatgattgttgtggtcgactttggaaacaat
cgaattctcgtcttctaa
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