Rissa tridactyla (black-legged kittiwake): 128904952
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Entry
128904952 CDS
T09443
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04217
Necroptosis
rtd04622
RIG-I-like receptor signaling pathway
rtd04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128904952
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128904952
04625 C-type lectin receptor signaling pathway
128904952
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128904952
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128904952
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128904952
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C67
128904952
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128904952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DZR_2
Motif
Other DBs
NCBI-GeneID:
128904952
NCBI-ProteinID:
XP_054046072
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All DBs
Position
2:complement(1502778..1521597)
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AA seq
815 aa
AA seq
DB search
MRGMTMTSHLPSAGDGNCYYILTEDCAYGSKYFQAGNMCFCSERSYLRNFSDDGPPTCFL
KVIMLDDSSTVTIKVEILQPVREEMAVFLLAISSHNERLNYFLERLSLEAALRAVPGQKV
LVEVDRQYFPGIIRYIGSISKNTLAVLSPFFFGVELQGEGENRGCSDGSYNGTEYFKCKR
NCGIFLPFSRVQFTPAPDDDYMKQKPKADTKEGVPVKVGDAVSFYVDEVLTKGIAMAVYR
EGTQWFVKVCPEEEGTTDIFREIPMDSVVKESLQSRLSSDVPALCTFPGDLAFISSLQGL
FSPFESDMGLGHPNQMKREISESAEECESGNSSLEVNSMVQITLDKGNQVSGIIRWLGYL
PQIKHKMAGVELDEDKGVTAGEWLGKYYFHCAPKRGLFVKLQSCQPDVRFQCSRNSELSL
MDYRGQEVLPQVPDSFPPLRNETAVHVLRGRMKGIQGHCNSCYMDAALFSLFSCTSVLDS
MLFKPFPLCDRNVQSILRDEIVNPLRKTGFVRARSVMHLREQLTEKGQCSSFTNAEKDPE
EFLNLIMQQILGIEPLLKLQSGSQEEQQDCYCYQIFMDKQEDLVVPDVQQLVEHSFLTYD
LKLVEIPSCFIIQMPRFGKEYKMFSKIIPSLELDITDLLLDSPRECCVCGDVATLECSEC
FKDKVFAATGLKQFCSTCSRQVHSHYRRKTHKPTRLHIPEEFHSRNSRGSQQVPREKMEL
FAVLCIETSHYVSFVKYGPENEHWMFFDSMADRHGDENGFNIPTVTLCPEVAKYLELPLA
VLALKQPRDMDGVAKRLFCDAYMYMYQSKKMALYK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcggggaatgacgatgaccagccacctgccttcagcaggggacgggaactgctattac
atcctgacagaagactgtgcttatggcagcaagtacttccaagctgggaacatgtgcttc
tgcagcgagagaagttacctgcgcaacttctccgatgacgggcccccgacttgcttcttg
aaagtcatcatgctggatgacagctccaccgtcacaataaaagtagaaatcctgcagcct
gtgcgtgaggagatggcagtcttcctcctggccatcagcagccacaacgaacgcttgaac
tatttcttggagaggctgagccttgaagcggctctgcgggcagtgccgggacaaaaagtg
ttggtggaggttgaccggcaatatttccctggaatcatccgctacatcgggagcatttcc
aaaaacactttagctgtgctgtctccgttcttcttcggggtggaattgcagggcgaggga
gaaaacagagggtgcagcgatgggtcttacaacggcactgagtatttcaagtgtaagcgg
aactgcgggatcttcctgccgtttagcagagtccagtttacacccgcgccagatgacgac
tatatgaaacagaagccaaaagcggacacgaaggagggggttcctgtgaaagtgggagat
gctgttagcttctacgtggacgaggtcctcacaaaaggaatagcgatggcagtttacagg
gaaggaacccaatggttcgttaaagtttgtccggaagaagaaggaacaactgacattttc
agagaaatccctatggactctgttgtgaaggaaagcttgcaaagtaggttatcatcagat
gtgcctgccctgtgtaccttccccggggatttagcatttatttcttctctgcaaggttta
ttttcacccttcgagtccgacatgggcttgggacacccaaaccaaatgaaacgagagata
agcgagagcgctgaggagtgtgaaagcgggaattcatccctggaggtgaactccatggtc
cagatcaccttggacaagggaaatcaggtttcgggaatcatccgctggttgggctacctg
ccccaaattaagcacaaaatggcaggagttgaactggatgaagacaagggggtcactgct
ggcgaatggctgggcaaatactacttccattgcgctccaaagcgcggcctcttcgtgaag
ctgcagtcctgccagcctgacgttcgcttccagtgttcgcgcaacagtgagctgagcctc
atggattacagagggcaagaagttcttccgcaggttccagacagttttcctcctctcaga
aacgagacagcggtgcatgtcctgcgagggcggatgaaggggatccaaggccactgtaat
tcctgttatatggacgcagctcttttcagcctcttctcctgtacgtccgtgctggactcc
atgctcttcaagcccttccctctgtgtgacaggaatgtccagagcattctgcgggatgag
attgttaatcccctccgaaagaccggcttcgtcagggctcggagcgtgatgcaccttagg
gagcagctaactgaaaagggacagtgttcaagctttaccaacgctgagaaagatcctgag
gagttcctcaatctcataatgcagcagatcctgggaatagagccgctcttgaaactgcag
tcgggaagccaggaggagcagcaggactgttactgttaccagatttttatggacaaacag
gaggatctggtggttcccgacgtgcagcagttagtggaacactccttcctgacttacgat
ctgaagctagtggagatcccatcttgcttcattatccaaatgccgcgttttgggaaggaa
tataaaatgttcagcaaaatcattccttccttggagctggatataacagatctgctgctt
gacagtccccgggagtgctgcgtgtgcggggatgtcgccaccctggagtgttcagagtgt
ttcaaagacaaggtattcgcagctacgggcctgaagcagttctgcagcacctgctccaga
caggttcactcccactaccgacgcaaaacgcacaagccaaccaggctgcacatcccagaa
gagtttcacagccggaactcccggggcagccaacaggtcccacgcgagaagatggagctc
ttcgccgtgctctgcatcgagacaagtcattacgtctcctttgtgaaatacggcccggag
aacgaacactggatgttcttcgacagcatggctgacaggcatggtgacgaaaacggcttc
aacattcccacggtaacgctgtgccctgaagttgccaaatacctggagttgccactggct
gtgctggccctgaagcaacctcgggacatggacggagtggccaagcgcctcttctgcgac
gcctacatgtacatgtaccagagcaagaagatggcgctttacaagtga
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