Rissa tridactyla (black-legged kittiwake): 128905064
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Entry
128905064 CDS
T09443
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128905064 (CDKAL1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
128905064 (CDKAL1)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
128905064 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
128905064
NCBI-ProteinID:
XP_054046463
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All DBs
Position
2:99272019..99697010
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AA seq
594 aa
AA seq
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MPAACDSVLEDIEDIVSAEDLKPHDRQFVRKNVFPKVRKRNSQKNTQTDDDPPSDSIIPG
AQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKIVPSCLSSLSPRKAQEGKKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEET
IKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDL
ASYPIEELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRL
GMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLK
EKVPGITIATDIICGFPGETDEDFQETMKLVEQYRFPSLFINQFYPRPGTPAAKMHQVPA
AVKKQRTKDLSQLFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLL
MGKMVEVNIYEAGKHFMKGQPVSDARVYTASITRPLAKGEVSGLTEEFRHAAQNGTNWKA
HPSAEIPIKTQPRSWMALQLPWQQEGGGVKILSVSLALLAVLVMFYYRGMKTEL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagatattgaagatattgtgtcagcagaagat
ttgaaaccacatgatcggcagtttgtaagaaagaatgtttttccaaaagtgcgaaaacgc
aattcacaaaaaaatactcagacagatgatgatcccccaagtgacagcattattcctggt
gctcagaaaatctggattcgtacatggggatgttctcacaataattctgatggcgaatat
atggctggacaactggctgcatatgggtacaaaattacagacaactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagattgtgccatcctgcctttcatcattgtctccaaggaaagcccaagaagggaag
aagaaagtggttctagcaggctgcgtgccgcaagcccaacctcgtcaggactacctgaaa
ggcttgagtattataggggttcagcagatagatcgtgtagtagaagttgtggaggaaact
attaaaggtcattctgtgagactgctgggtcagaaaaaggataatggaaaacgtctggga
ggagcacgactggatttgccaaagattaggaagaatccactgatagaaatcatttccatc
aatacagggtgtctcaatgcatgtacctactgcaaaactaagcatgccagaggagatcta
gcaagttatccaattgaagaactagtggatagagccaaacagtcttttcaagagggtgtt
tgtgagatatggctgaccagtgaagacacaggggcttatggcagagacattggcacagac
ctccctacgcttctgtggaagctggttgaagctattcctgagggagctatgctgaggctt
ggcatgacaaaccctccctatattttagagcatctggaggaaatggcgaagattctcaat
catccaagagtatatgcttttctgcacataccagtccagtcagcctctgacagtgtgctc
atggacatgaaaagagaatactgcgtggcagacttcaaacaagtagtggatttccttaaa
gaaaaagtgcctggaataacaattgctacagacatcatctgtggttttccaggagagaca
gatgaagacttccaagaaacaatgaaacttgtagaacaatacaggtttccgagcttgttt
attaatcaattttacccacgcccaggaactccggctgcaaaaatgcatcaagttccagct
gcagtgaaaaagcagagaacaaaggatctgtcccagctgtttcattcatataatccatat
gatcataaggttggtgagaggcagagggttctggtaacagaagaatcctttgattccaat
tactatgttgctcacaatcctttctatgagcaggttcttgtgccaaaggatcctctgtta
atgggtaagatggtagaagtgaatatttatgaagctgggaaacattttatgaaggggcaa
cccgtgtcagatgccagggtttacactgcatccatcaccagaccgttagcaaaaggagaa
gtttctggtttaacagaggagttcagacatgcagcacagaatggcacaaactggaaagca
cacccttctgctgagatcccaataaaaacacagcccaggtcgtggatggctttgcagctc
ccatggcaacaagaaggaggtggagtgaagatactgtctgtcagcctggctctgctggca
gttcttgttatgttttactacagaggaatgaaaacagaactgtga
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