Rissa tridactyla (black-legged kittiwake): 128905195
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Entry
128905195 CDS
T09443
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128905195 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128905195 (EXOSC7)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128905195 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
128905195 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128905195
NCBI-ProteinID:
XP_054046863
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Position
2:119494541..119516311
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AA seq
291 aa
AA seq
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MASVVLSEAEKFYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGTEIANTLYRVFSSESSVD
LKSLCINPREHCWVLYVDVLLLECGGNLLDAISIAVKAALFNTRIPKVRVLEDEEGSKEI
ELSDDPYDCIRLNVDDVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGALTSMK
KVGKGSLDPESIFEMMETGKRVGKSLHIALQKILDEEESLGTSRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggcggagaagttctacatcgtccatggtgtccaggag
gaccttcgtgtggatggtcgtggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagttaagctgggacacacggatatcttggta
ggtgtaaaagctgaaatggggacaccgaagttggagaaaccagacgaaggttacctggaa
ttctttgttgactgttctgcaaatgctactcctgaatttgaaggccggggaggagaagaa
cttggcacagagatagcaaatacactctacagagtatttagcagtgagagcagtgtagac
ttgaaatcactttgtattaatcccagagagcactgctgggttctctatgttgacgtattg
ttactggaatgtggtgggaacctccttgatgcaatctctatcgcagtgaaggcggctctg
tttaacacaagaatacccaaagtgcgtgttctggaggacgaagaaggctctaaagagatt
gagctgtctgatgacccttatgattgtattcgacttaatgtggatgatgtgccctgcatc
gtcacactaagcaaaattggatataggcatgtggtggatgctacccttcaggaagaagcc
tgttctttggccagtctgcttatttctgtgaccagtaaaggtgccctcacttctatgaag
aaagtggggaaaggtagccttgatcctgagagtatttttgaaatgatggagacgggaaaa
agagtgggcaagtcattgcatatagcccttcagaagattttggatgaagaagagagtttg
gggacctcacggcagaaagttggatttttaggatga
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