Rissa tridactyla (black-legged kittiwake): 128905229
Help
Entry
128905229 CDS
T09443
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128905229 (VPS50)
Membrane trafficking [BR:
rtd04131
]
Protein recycling
Others
EARP complex
128905229 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
128905229
NCBI-ProteinID:
XP_054046957
LinkDB
All DBs
Position
2:complement(141705721..141795399)
Genome browser
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPSKEDLRELREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEEATVSSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEEYNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagtcctattgaaagctttcggattcctagtaaggaggacctcagagaacta
cgtgaagaaccaactgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaaaaaagttgcagacttaattcttgagaaacagcctgcatatgttcaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagctgttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggcttcttgcaaac
caaaggaaacgacagttgcttattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaagactatccaggagctatt
cagctgtgtttggaatgccagaaagctgccagcactttcaagcattacagttgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggagcaattggacgtagca
ctctccaaaatatgtaagaactttgatatcagtcattacacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaggcc
attcacaacactgtgtttcaagtagtccttggatacgtggagctgtgtgcaggaaacaca
gacaccaaatttcagaagttacagtacaaagacctctgtacacatattacttcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaatcatgaccaagatgaggaagcaactgtgtcttctgtt
tcagatggcagcaatgtgattggaactgaagagaacagttttgaccgcagctatgtgaaa
aaaaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggcttatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacagagtgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacttgggaactttgtcctgttaaatcaagc
tttagtattctgcagcttcatgaatttaagttcatggagcagtcacgttccccgtctgtg
tcacctagtaagcagcctgcttcagcaatttccacagcagtaaccttatttgagcagtac
tgtaacggaggaaacccatttgaaattcaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcagacgagcaagaaaaaagcgcatatcaagagtat
gatagtgacagtgatgttcccgaagagttgaaaagggattatgtggatgagcagacggga
gatgcccctgtgaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattat
aacctaaataaagtgaatgcacctatcctaacaaacactacactgaatgtaataaggctt
gttgggaaatatatgcagatgatgaatattctgaaaccaattgcatttgatgtgatccac
ttcatgtcccagctcttcgattactatctgtatgcagtctatacgttttttggccgaaat
gacacgtttgaatcaacaggactaggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggaggtatctgctgatcccacaggaactctcaca
gctgctgaagagagaaaggagaaggtgccgagcccacatctcagtcatctcgtagttttg
acatctggcaattcgctatatggtttggcagagagagtggtagccacagaatccttggta
tttctggcagagcagtttgagtttcttcagcctcatcttgatgcggtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtatcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgctgcttctc
atgactaatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtcgac
gctcttttaaaggaatttgaagaatataacagaaggttgaacgaagtgtccaagagagtc
cgtattccactgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actctcgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggactttcaacaattcttaatgaaactagaaaagttaacagacattaggcctatc
ccagataaagaatttgtggagacctacattaaagcatactacctaacagagaatgacatg
gaacgctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
gtttgtctgggctcccacatcaacaaaaaggcaagacagaagctgctagctgctattgac
gacatagacaggcctaaaagataa
DBGET
integrated database retrieval system
