Rissa tridactyla (black-legged kittiwake): 128905265
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Entry
128905265 CDS
T09443
Symbol
PCDH8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128905265 (PCDH8)
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128905265 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
128905265
NCBI-ProteinID:
XP_054047068
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All DBs
Position
1:complement(37043879..37047511)
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AA seq
998 aa
AA seq
DB search
MSPLRLLAVACLLALSRGKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPRAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPAFAQGSVT
VELPEDAPPGSLLLDLDAVDPDEGPNGEVVYTFGSQVPPEARRLFRLDPRSGRLTLEAAV
DYERTRTYELDVRAQDRGASPRTATCTVIVRLTDVNDNAPRISISALRGAASAAGVAYVS
EAAASESFVALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTLVKVRMVDQNDNPPVIIHPVLTNGTVEISVSSKTSRDSLVAQIKARDADDG
ANAELTFAFLEEPQQDLFTINPSNGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQEIAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRR
KKGNEIKNNASLKEQIDISHLEKGRQEEGSPRGNVFEVRTFPSKTSFTSPDTSPAAEEIS
TAESGSDSTCLYEGQKRLRGPNGEQGFAAAPSYGKEAAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLYPAPSTRYLGPQTDTAEKV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgtcgcctgcctgctggccctgtcccgcggcaagacg
gtgaggtaccgcacggacgaggagggggcgcccggcacggtgatcggtacgctggccgac
gagatgccggtgaaggcgccgggggagatgagcttccgcctgatgcggcagttcagcaac
agctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggggaagcggggctg
gaccgggagcggctgtgcgggcaggccccccagtgcgtcctggccttcgacgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgtgacatcaacgac
aatgccccacgtttccctcgtgcccagatggcgctggaggtgtcggagagcgccgcaccg
ggcacccgtctcccactggaggtggccgtggatgaggacgtgggctccaactccatccag
agcttccaggtctccctcaacagccactttggtgtggaggcgcagacacgggcagatgga
gcacgctgtgcagacctcgtgctgctccaggagctggaccgcgagcgccagccctcctac
acactggagctggtggccaaggatggtggcagcccggcacgctcaggcacggccactgtg
cacgtccgtgtcctcgatgccaacgacaacagccctgccttcgcccagggctcggtcaca
gtggagctgcctgaggatgcgccacctggctccctgctgctcgacctggacgctgtggat
cccgacgagggccccaatggcgaggtggtctacaccttcggcagccaggtgccccccgag
gcacggcggctcttccgcctcgacccacgctcgggccgcctcacgttggaggccgctgtg
gactatgagcgcacccgtacctacgagctggacgtgcgtgctcaggaccgtggcgccagc
ccccgcaccgccacctgcactgtcatcgtgcgcctcactgatgtcaacgacaacgcgccg
cgcatcagcatcagcgccctccgtggtgccgccagtgccgctggtgtggcctacgttagt
gaggcagcggccagcgagagttttgtggcccttgtcagtgcctcagaccgtgactcaggt
gccaatgggcaggtgcgctgtagccttcgtggccatgaccactttgccctgcagcgtgca
tatgaggacagctacatgatcgtcacaacggcggcgctggaccgcgagcgcatccctgag
tacaacctcaccgtggtggccgaggacctgggctcgccacccttcaagaccgtccgccag
tacacagtgcgggtgagcgatgagaatgacaatgcgccactctttgccaagcccctctat
gaggtggccgtgccagagaacaaccctccaggtgcctacatcaccactgtggtggcccgc
gaccctgatcttggccacaacggtaaggtcacttaccggctcctggagacacaggtcatg
ggggcccccatctccacctatgtctcagtggaccctgccactggggccatctatgccctc
aggacgttcaactatgagatcctcaagcagttggacctgaggatccaggccactgacggt
ggctccccacagctttccagcagcacccttgtcaaagtgaggatggtggaccagaacgac
aaccctcccgtcatcatccacccagtgctcaccaatgggacagtggaaatcagtgtgtcc
agcaagacctcccgtgattccctggtagcccagatcaaagctcgagacgcagatgacggg
gccaatgccgaactcacctttgccttcctggaagagccccagcaggaccttttcaccatc
aacccaagtaatggggacatcgtgctgaggggagacctctccgaagagctgggacagctg
ttcaaggtcatcctcaccgtgacagacaatggcagaccccctctggccacgactgccaca
gtcaacttcctggtgaccgccactgctccttccagtatccaggagatagccaagcccagc
tcctgggaaggaaaggctttgcagtgggatatccctctgatagtgatcatcgtcctggcg
ggcagctgcaccctcctcctggtggctataatcaccatcgccaccacctgcaacaggcgc
aagaaggggaatgagatcaaaaacaacgcttctttgaaggagcagatagacatctcccac
ctggagaagggccgacaggaggagggcagcccgagggggaatgtgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccccgacacttctccagctgctgaagagatctcc
actgctgagagcggcagcgacagcacttgcctctacgagggtcagaagaggctcagagga
ccaaacggggagcagggtttcgctgctgctccgagctatggcaaggaggctgctcccccc
gtggccatttggaaggggcactccttcaacaccatctccggccgggaggcagagaagttc
agcggcaaagacagcggcaaaggcgacagcgattttaatgacagcgactcagatatcagc
ggagatgccctgaagaaagatctcatcacgcacatgcagaacggtttgtgggcatgcacg
gccgagtgcaagatcctgggccactcggaccgctgctggagcccctcctgtggccgagcc
aacccccacccctctccccatccctcagcacccctctccaccttctgcaagagcacgtcc
ttgcccagggatcccctccgcagggacaacttttatcaagcccagctgcccaaaacagtg
gggctgcagagcgtctacgagaaagtgctgcacagggactttgaccggacgatcacgctg
ctctccccgccgcgccccgcgcggctccccgaccttcaggagattggggtgcccctctac
ccagccccctcgactagatacctgggtccccagactgacacggctgagaaagtgtag
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