Rissa tridactyla (black-legged kittiwake): 128905373
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Entry
128905373 CDS
T09443
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128905373
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128905373
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
128905373
NCBI-ProteinID:
XP_054047370
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All DBs
Position
2:complement(161700282..161736348)
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AA seq
2006 aa
AA seq
DB search
MAEFLLPGTNNFRKFTYESLAAIEKRIAAKRNSRRNTVDQKPEEKPRPQLDLKAFQKLPA
LYGNPPPELIAEPLEDLDPYYKDHKIFIVLNKKKTIFRFSATRALWILSPFHPIRRTAIK
ILVHSLFTLFIMCTILTNCVFMALTESSKTSPSPSWSKYVEYTFTGIYTFESLIKILARG
FCLNEFTFLRDPWNWLDFSVIVMAYVGAFSNLGSVSVLRTFRVLRALKTISVVPGLKIIV
GALIQSVKKLANVMILTVFCLSVFALIGLQLFKGNLRQKCVRNSTEVNEMLHFLNKRWES
YELFVNDTAYFAKKAGTSDVLLCGAGAGICPPDYVCLRAGPNPDYGFTSFDTFGWAFLSL
FRLMTQDYWERLYQQTLRASGKVYMLFFMLVIFLGSFYLVNLILAVVTMAYEDQNKATIA
ETEAKERKFREAMELLQKEQESLAIKGIDILSDSSFETSSLSTKEIKERSNRKKRNKSLG
IEDNEEKQQFPKSQSTDSQRKLSFLGLVYGPNANQVKRRLSHGSVFNFQIPALEVDSRTD
FGDGETCSAGEREILCRSLSVTQMGRRSSVQSQMSPSSHPATPNCVQSSTWANVDNCNGV
IFGTGGGSSRVHSLEPASSEGVMLPTVMEDPGKGDLQPAVNDESSMTHLPPHLSVEYFNE
AFQRQRAASAVSIITSVLEELEESQRRCPPCLNDFALKYLIWDCCPLWLRIKKKVAAFIK
DPFIDLTITVCIVMNTLFMALEHNNMSDNFKSMLNVGNLVFTGIFTAEMILKIIALDPYY
YFQQHWNIFDSIIVTLSLVELSLPKHKSKKERRKGGTLSVLRSFRLLRVFKLAKSWPTLN
TLIKIIGNSLGALSNLTLVLAIIVFIFAIVGVQLFGRSYGENRYKIHKSGEPRWHMMDFF
HSFLIIFRILCGEWIETMWDCMVVAEQPLCLLVFLLVLVIGNLVVLNLFIALLLNSFSTD
CLQTAEDDGEMNNLRIAFARIHKGFHFVKSVTWDTCCGKLRHVKKAHRKKIKLTAQNPLG
FKHEEIKSCKENYSNEWTEKNGDKCSGLEDFITNPNVFVCVPIAEEENTSEGFEDEDKLS
TFTDIECSKQDENHLRQRGERGKNSGSWSKGSGFSSEEFSVLYLGKDRKAEPSSPEQKEF
DNISSSEGSTVDLTNPEDLLRKIPEFAEDFKTPEKCFPEGCVRYFRCYAGSAIKFGGERW
WNLRKTCFQIVEHSWFESFIIFMILLSSGALAFEDIHIREREHIKTMLAFLDKMFTFIFV
LEMLLKWVAYGFKKFFTNAWCWLDFLIVNISLIIMFGGSFGPMKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNLTEEDSEINDS
INNITDCRMYNNTGKIFWVNVKVNFDNVGSGYLALLQVATFKGWTDIMYAAVDSREKNEQ
PRMEHSLFMYLYFVNFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNA
MKKLGKKKPQKPIPRPLNRYQGFLFDIVTRQAFDVVIMILICLNMISMMVETYDQSETKS
DILNKINTLFVAIFTAECVLKLVALRQYYFSNAWNIFDLVVVIMSLVALLLSGIGKAFEH
FLPPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MANFAYVKMEAGIDDMFNFQTFPNSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNVNGT
TGECGKPAIGIIYFVSYIIISFLIVVNMYIAVILENFNAATEESTEPLGEDDFDIFYEIW
EKFDPEATQFITFSALPDFADGLAEPLRVPKPNKVELIAMDLPMVSGDRIHCLDILFAFT
KRVLGDSGEMDTLKVQMEEKFMAANPSKKSYEPISTTLRHRQEEASATVIQRAYRSHLLL
RSVKQASYLYHRRTCSGDTLRGAAPEKEGLIASMMGENYNRSPDKSETLSSASFPPSYDS
ATRASSGNLMVENGEITGNQQSPDIK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttcttactgccgggtaccaacaacttccgcaagttcacttacgaatcattg
gctgctattgaaaagagaattgctgccaagaggaattctcgaagaaatactgtagaccag
aaacctgaggagaaaccgcgtcctcaacttgacctaaaagctttccagaagttaccagct
ctctatggaaatccacctccagagctcattgcggaaccactggaggatctcgacccttac
tataaagatcataagattttcatagtgctaaacaaaaagaaaacaatcttcagattttct
gctacacgtgccttatggatcctcagtcctttccatccaatccgaagaacagcaattaaa
attttagtacattcattattcactttgtttatcatgtgcactattttaactaattgtgta
ttcatggctctgactgagtcctctaagacttctccatctccttcatggagcaagtatgtt
gaatatactttcactggcatttacacatttgaatcattgataaaaatattggcaagagga
ttctgtctaaacgaattcaccttccttcgagatccctggaactggttggatttcagcgtt
attgttatggcgtacgtgggagcatttagtaacttggggagcgtttcagtccttcggacc
ttcagagttctgagagctttgaaaaccatttcagtagtcccaggactcaagatcattgta
ggggcacttatccagtctgttaagaaacttgccaatgtgatgatcctgaccgttttctgc
ctgagtgtttttgccctcataggcctccagctttttaagggcaatctaagacaaaagtgt
gtcaggaactctacagaagtcaatgaaatgcttcatttcctcaacaaaagatgggaatcc
tatgaattatttgttaatgatacagcatacttcgctaagaaagcgggcacctcagatgtt
ttgctatgtggtgctggggctgggatctgtcctccagactacgtatgcttgagagctggg
ccaaatcctgattacggttttactagttttgacacgtttggctgggctttcctttcccta
ttccgcctgatgacccaggactactgggagcgtctgtaccagcagaccctcagagcttct
gggaaggtgtatatgctcttcttcatgctggtcatctttctgggctcattttatctagtc
aacttgattctggctgtagtaacaatggcatatgaagaccagaacaaggccaccattgct
gaaacggaggcaaaggagaggaaatttcgagaagccatggaattattacagaaggagcag
gagtcattggccattaaaggaattgatatcctgtcagatagctcctttgaaacctcttct
ttgtctaccaaagaaatcaaagaaagaagcaataggaaaaagagaaataagtccttgggg
atagaagataatgaagaaaaacaacaatttcccaagtcacagtccacagacagtcaacga
aagttgtctttccttggcctggtgtatggtcccaacgcaaatcaggtgaaacgcagactc
agccatgggagcgtcttcaatttccaaatacctgctctagaagtcgattccagaacggac
ttcggtgacggggaaacctgcagtgctggggaacgtgaaatcctgtgtcggtcgctgtca
gtcacgcagatgggaagacgctccagcgtgcaaagtcaaatgagccccagctctcaccct
gctaccccgaactgtgtgcagagcagcacgtgggccaacgtggacaactgcaacggggtg
atttttgggacgggaggaggaagcagcagggtgcacagtctagagccagcatcttcagaa
ggagtgatgcttccaacggtgatggaagacccgggaaagggtgatctacagccagctgta
aatgatgagagcagcatgacacatttgcctcctcatctgtcagtggaatactttaacgag
gcatttcagagacaaagggcagcaagtgcggtcagcataattaccagcgtcttggaggaa
cttgaagaatcccagcggagatgcccgccgtgcctgaatgattttgctttaaagtatcta
atttgggactgttgtccactttggctgagaatcaagaaaaaagtggctgctttcataaag
gatccttttattgatctcaccatcactgtttgcattgtgatgaacactttgttcatggcg
ctggagcacaataatatgtcagataattttaaatcgatgcttaatgtaggcaacttggtt
tttacaggaatcttcactgcagaaatgatcttaaaaatcattgctctagatccctattat
tattttcagcagcactggaatatttttgacagtataattgtcacactgagtttagttgaa
ctgagtttacccaaacacaaaagcaagaaagagaggagaaaaggaggaaccctgtcagtt
ttacgatccttcagactgctgagggtcttcaaactggcgaagtcctggccaactttaaac
actctaattaaaatcattggtaactccctgggagcactgagtaatctgaccctcgtcctg
gcaatcatcgttttcattttcgctatagtaggggtgcaactttttgggagaagctatggg
gaaaacagatataaaatacacaaaagtggcgagccacgctggcacatgatggactttttc
cactcattcctcatcattttccgaattctgtgtggcgaatggattgagaccatgtgggac
tgcatggtggtcgctgaacaaccactgtgccttcttgtttttctgctagtccttgtgata
ggaaatttagtggttctcaaccttttcattgcactgctgctgaattccttcagtaccgac
tgtctccagacagcagaggatgatggagagatgaacaacctccggattgccttcgctcgg
attcacaagggatttcactttgtgaagagtgttacgtgggatacctgctgtggaaagctc
aggcatgtaaagaaagcacacaggaagaaaatcaaattgactgcacagaacccacttggg
ttcaaacatgaagaaattaaaagttgtaaagaaaattacagtaatgaatggactgagaaa
aatggggacaaatgctcaggtcttgaagattttattaccaatcccaatgtatttgtttgt
gtccctattgctgaggaagagaatacaagtgagggttttgaagatgaagataagctgagt
acttttacagacatagaatgcagcaaacaggatgaaaatcacctgaggcaaaggggagaa
agagggaaaaattcgggaagctggagtaaaggatcgggattttcctctgaagaattcagt
gtactttacctaggaaaggataggaaggctgaaccgtcatcaccagaacaaaaggagttt
gacaatatcagctcttctgaaggcagcacggtggatctgacaaatcctgaagatcttttg
aggaagattccagagtttgctgaagacttcaagactccagaaaaatgttttccagaaggt
tgtgttcgatactttcgttgttatgcgggtagtgccataaagtttggaggagaaagatgg
tggaatctgagaaaaacctgcttccagattgttgaacactcctggtttgaatcctttatc
atattcatgattcttctgagcagtggagccctggcatttgaagacatccatatacgcgag
agagaacacattaaaactatgttggcatttcttgacaaaatgttcactttcatctttgtt
ctggagatgctcctgaaatgggtggcttatggcttcaagaagtttttcaccaatgcctgg
tgctggctggacttcctcattgtaaatatctctttaataatcatgtttggcggttcgttt
ggccccatgaaatctcttaggactcttcgagctctgagacccttaagagcattgtcacga
tttgaagggatgagggtggtggtcaatgccctcgtgggagccatcccttccatcatgaat
gttctgctcgtctgcctcatcttctggctcatctttagcatcatgggagtgaacctcttt
gctgggaagtttgggaaatgtgtgaatctgacagaagaagattcagaaataaatgattcg
atcaataacataacagactgtagaatgtataataacacaggaaaaatattctgggtgaat
gttaaagtcaactttgataatgttggctctggctacctggcgctgcttcaggtggcaaca
tttaaaggttggacagacatcatgtacgcggccgtagattcacgagagaaaaatgagcag
ccgcgaatggagcacagtctatttatgtatctctattttgtgaacttcatcatctttgga
tctttctttaccctgaatctctttgttggtgttattattgacaacttcaaccaacaaaag
aaaaagataagtggggaagatatctttatgacagaagaacagaaaaaatattacaatgca
atgaaaaagttaggaaagaagaaacctcaaaaacccattccaagaccgttgaacagatac
caagggttcctttttgacatcgtaacacgccaggcttttgatgttgtaatcatgattctc
atctgccttaacatgatctccatgatggtggaaacctatgaccaaagtgaaacgaagtct
gacatccttaacaaaatcaatacgctcttcgttgccatctttactgcagaatgtgttctg
aagttggtggctctgaggcagtactatttctcaaatgcctggaacatatttgatttagtt
gtagtgatcatgtcacttgttgccttactgctttctggcatcggtaaagcatttgaacat
ttcttaccacctacactcttcagggtcattcgcctggctcggattggacgaatactgaga
ctcatccgggctgccaaaggaattcgaactctgctttttgcgttaatgatgtccctacct
gctctatttaacattggcctcttgctttttctggtcatgttcatttatgctatttttggc
atggctaactttgcctatgtgaagatggaagctggcatcgacgatatgttcaacttccaa
acctttcctaacagcatgctctgtctctttcaaatcactacatcagctggctgggatggt
ctcctcagtcctattttaaacactgggccaccatactgtgatccaaacgtaaatggtact
acaggcgaatgtggtaaacctgccataggtattatttattttgtaagttacatcattata
tcatttctcatagttgtaaacatgtatatagctgttattctggagaacttcaatgctgct
actgaggaaagtacagagcctttaggggaagatgactttgacatcttttatgaaatttgg
gagaagtttgatcctgaggcaactcagtttataactttctctgcacttccagacttcgca
gatggtctggctgaacctttacgtgtaccaaaaccaaacaaagttgaactcatagcaatg
gacctgcctatggtcagtggagataggatccactgcttggatatcttgtttgcttttacc
aaacgagtcttaggagattctggggagatggatactcttaaagtacaaatggaggagaag
ttcatggctgccaatccatccaaaaaatcctacgagccaatctccactactctcaggcat
agacaagaggaagcttctgccactgtcatccagcgcgcctacaggagtcatttgctcctg
cgctccgtaaagcaggcttcttacctgtaccatcgcagaacttgcagcggtgacactctt
agaggtgctgctccagaaaaagaaggacttattgcatctatgatgggtgaaaactataat
agaagtcctgacaagtctgaaactttgtcctcagcatcctttcctccatcatatgacagt
gccacgagagccagtagtggcaatctcatggttgagaatggagaaattacaggtaatcaa
caatctccagacatcaaatag
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