Rissa tridactyla (black-legged kittiwake): 128905645
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Entry
128905645 CDS
T09443
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128905645 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtd01007
]
128905645 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128905645 (GARS1)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128905645 (GARS1)
Enzymes [BR:
rtd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
128905645 (GARS1)
Amino acid related enzymes [BR:
rtd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128905645 (GARS1)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128905645 (GARS1)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128905645 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
DUF5915
Motif
Other DBs
NCBI-GeneID:
128905645
NCBI-ProteinID:
XP_054047997
LinkDB
All DBs
Position
2:162933435..162961288
Genome browser
AA seq
725 aa
AA seq
DB search
MPLPPRSALPALPLLLRRLLRLACPPAAPLRSRPAPAATPMDGPQAEALLAPLRQAVRLQ
GELVRKLKEEKAPQADIDRAVAELKARKRVLEAKELALQPKDDIVDRVKMEDTLKRRFFY
DQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTMLTPEPVLKTSGH
VDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQEL
ADLFVNYNVKSPITGNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEF
NQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFENVADLNIL
LYSSKAQVSGQSAHVMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHME
NEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLIAEKPLKEPISVNI
VQFEANKGAIGKAYKKDAKVVMEYLSVCDECYITEMEQLLNEKGEFTVETEGKTFKLTND
MVTVKRFQKTLHVEEIVPNVIEPSFGIGRIMYTVFEHTFRIREGDEQRTFFSFPAVVAPF
KCSVLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSIGRRYARTDEIGVAFGITIDF
DTVNRTPHTATLRDRDSMRQIRAEISELPAVIRDLANGYLTWADVEAKYPQFEGQETGKK
DTIEE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccgccccgtagcgccctgcccgccttgccgctgctgctccgccgcctgctc
cgcctcgcctgcccgcccgccgccccgctccgctcccggcccgccccggccgcgaccccc
atggacggtccgcaagccgaggcgctgctggcgcccctgcggcaggcggtgcggctccag
ggagaactggtaaggaagctgaaggaagagaaagctcctcaggcggatatagacagagct
gtagcagagctcaaagctcggaagagggtcctagaagcaaaggagctggccttacagccc
aaagatgacattgtggacagagttaaaatggaagacaccctgaaaaggaggtttttctat
gatcaagccttttctatttatggaggtgtcagtggtctgtatgactttgggcctgttggg
tgtgctttgaagaacaacatcatccaggcgtggagacagcactttattcaggaagagcaa
atcctggagattgactgtaccatgctcacaccagagccggttctgaagacttctggccat
gtagacaagtttgctgacttcatggtgaaagatgtgaaaaatggggaatgttttcgtgct
gatcatctcttaaaagctcacctgcaaaagcttatgtctgacaagaagtgcacggcagaa
aaaaaggcagagatggaaaatgttctaacacagttggacaactatggccagcaagaactt
gcagatctctttgtgaactacaatgtgaaatcacctatcactgggaatgacctgtcccct
cctgtttctttcaatctgatgttcaagacctccattgggcctggaggaaacatgcctggc
tatctgaggccagaaactgcacagggaatattcctcaacttcaaacgtcttctggagttt
aaccaaggcaaactgccttttgctgctgcccagattggaaattccttcagaaatgaaatc
tcaccccgctccggccttatcagagtgagggaattcaccatggcagaaatcgagcacttt
gtggatcccagtgagaaaaatcaccccaagtttgagaatgtggcagatctcaacatcctg
ctctactcttccaaggcccaggtcagcgggcagtcggcacatgtaatgcggctgggagat
gctgtccaacagggcgtgatcaataactccgttctcggttacttcattggcagaatctac
ctcttccttacaaaggttggtgtatccccagagaagctgcgcttccgacagcatatggag
aatgagatggctcattacgcctgtgactgctgggatgcagagtccaaaacatcgtatggt
tggattgagatcgttggctgtgctgatcgttcctgctatgacctctcctgccatgcccgt
gccaccaaagttcctcttatagctgagaagcctctcaaagaacctatatcagtcaacatt
gttcagtttgaggcaaataagggagccattggcaaagcttataagaaggatgcaaaggtg
gtgatggagtacctttccgtgtgtgatgagtgttacatcactgagatggagcagctgctc
aatgagaaaggggaattcactgttgaaactgaagggaaaacttttaaattaacaaatgac
atggttactgtgaagagatttcagaagacattacatgtggaagaaatagtcccaaatgta
attgaaccctcatttggtattgggaggatcatgtacacagtgtttgaacacacattccgc
atccgggaaggagacgagcagagaacgttcttcagcttcccagctgttgtagcaccattc
aagtgctccgttcttcctctaagccagaatcaggaattcatgccttttgtcaaggaatta
tctgaagcactcaccaggaacggcatctctcacaaggtggacgattcctctggatccatc
ggccggcgctatgccaggactgatgagattggcgtggcctttgggatcacgatcgacttt
gacaccgttaaccggacacctcacaccgccaccctgagagaccgcgactcgatgcgccag
atccgagccgagatctcggaacttcctgccgtcattcgtgacctggccaacggttatcta
acttgggctgacgttgaggcaaagtatccacaatttgagggacaagagactggtaaaaag
gacacaatagaggaataa
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