Rissa tridactyla (black-legged kittiwake): 128906036
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Entry
128906036 CDS
T09443
Symbol
CDH17
Name
(RefSeq) cadherin-17 isoform X1
KO
K06811
cadherin 17, LI cadherin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128906036 (CDH17)
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Major cadherins
128906036 (CDH17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_CELSR2_9th
Cadherin_4
Peptidase_M6
He_PIG
Motif
Other DBs
NCBI-GeneID:
128906036
NCBI-ProteinID:
XP_054048796
LinkDB
All DBs
Position
2:26623543..26655313
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AA seq
834 aa
AA seq
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MFKLCGLPFLLVVHSAMCQNFDDLRVSGPLKDMNFSIPEGGGMRFIYQFISEPPAVSFRA
TGEKDGIIDIAPKTGILYLNGSLDWETKAVHRLQVESLDEKGNIVKGPYAVTIYVEDVND
NPPEFDQLKYTGVVRQNSRPGKPFMQVHATDRDDPATPHAQLTYSILHHFPNPYSEMLFQ
IDNVTGAISPSKKGSFYLDPQKQDTFTLVVTVKDMAGMTTNAFTNSADVIITVKESLWKA
PPTIHIQENSTQVHPVNISQVQSNEQGVIYDLFEKEKLPRLPFSIDQNGVIYVTEPLDRE
EKDTYSFFAVTKDNTGELVDKPLNIHVIVEDINDNPPVCQQAVTIIEVQENEGGGSSIGT
VFATDSDKKDTLNSRLQFKIKSQVPDVPASNLFVIQQETGILQLTGTSLSKHIVSNYSLE
VLVTDRVFQTICDVQIHVIDTNDQIPIFERSDYDNVTVAENVTVGTVILEIQATDGDEPA
TGSSYIIYQVKEGDPNNTFIIETDPETNRGFIKINKALDFEAAPVYNLVINATNPEPLVS
GVQYNSSSLALFKVFVTNVDEPPVFHKTVYNTEVSEDIPVNTLVVTVEAYDPEGDSVRYS
LEGDVRKWLKIDSTTGQIYSASTLDREQQEMYMVDVVASELNNAAQKSKTTVILHLRDVN
DNPPRLVTDYPTFFCYPVMGGERALIQATDDDEQWFFSTLTFSLVDDMNTRNNWEISKAN
ATHAYLSPKHANFEEKVYSVPVIIKDNGKPPLERKVDLEVSVCKCSSENWCFINIERQHS
WPTVGQAIGILFGVLLIIGCIVGGVFFHMKYKQKNEKKSHQKDVKDRSELNRLA
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagctgtgtggacttccatttctgcttgtcgttcactcggctatgtgccagaat
ttcgatgacctgcgtgtaagtgggcctctgaaggacatgaatttctctattccagaagga
gggggaatgcgcttcatttaccagttcatatctgagccacctgctgtgagtttcagagcg
actggtgaaaaagatggaataattgacattgcaccgaagacaggtatcctgtacctcaat
gggtcgctggactgggagaccaaagcagtgcacaggctgcaggtggaaagtctggatgaa
aagggaaacatagtgaaaggtccatacgctgttacaatatatgtggaggatgtcaatgac
aacccaccagaatttgaccagctaaagtacaccggagtcgtgaggcagaactcccgtcca
ggcaagcccttcatgcaggtccacgccactgaccgcgatgatcctgcaactccccacgca
cagttgacgtacagcattctccatcatttccccaacccttattcagaaatgcttttccag
attgataacgtaactggagcaatctcaccaagtaagaagggctctttttacttagatccg
caaaagcaggacaccttcacgcttgtcgtcaccgttaaggacatggcagggatgacaaca
aacgctttcaccaacagtgctgatgtgatcatcactgtgaaggagagcctgtggaaagct
ccccccaccatccacatccaagaaaactcaacccaggtccaccctgtcaacatcagccag
gtgcagtcaaatgagcaaggtgtaatttatgacctttttgaaaaagaaaagctgcccagg
ctcccattttccattgatcagaatggggttatttatgtgaccgaaccattggacagggaa
gaaaaggatacttattctttctttgcggtcacaaaagataacacgggagaactggtggac
aagcccctgaacattcatgttattgtagaagacattaatgacaatccacctgtgtgccag
caggccgtcactataattgaagttcaagaaaatgaaggtggaggaagtagtattggcacc
gtgtttgctacggacagtgataagaaggacacccttaactctcgtctgcagttcaaaatc
aagagtcaggttcctgatgttcctgcaagtaatctgtttgttattcagcaagagactggg
attttgcagttaactggcacttcgttgagcaagcacatcgtatccaactattccttggag
gtgctggtgacagacagagtattccaaacaatctgtgacgtgcaaatacatgtcatcgac
accaatgatcagattcccatctttgaaagatcagattatgacaatgtgactgttgcagaa
aatgtcacagtaggaacagtgatattagaaatccaagctaccgatggagacgagcctgcc
acagggagctcctacatcatttaccaagtgaaggaaggagatccaaacaacacattcatc
atagagacagatcctgaaacaaaccgagggttcatcaagattaacaaggctcttgatttt
gaagcagctccagtgtacaacctggtgatcaatgccacaaaccctgaaccattggtctca
ggcgtgcagtacaactcaagctcccttgccttgtttaaagttttcgtaacaaatgtggat
gagccacctgttttccacaagaccgtttacaacacagaagtgtctgaagacattcctgtc
aataccctggtcgtgacggtggaggcctatgatcctgagggggattctgtacgatactcc
ctagaaggtgacgtgaggaaatggctgaagattgattcaaccactgggcagatatacagc
gcttccactttggatcgagaacagcaagaaatgtacatggttgatgttgttgcctcagaa
ctaaataatgcagctcagaaatccaaaacaaccgtgatactacacttacgtgatgtgaat
gacaaccctccacggttagttacggattatcctactttcttctgctacccagtcatggga
ggagagagagctttgattcaagctactgatgatgatgaacagtggtttttctcaacactt
actttttctctcgtggatgatatgaatacaagaaataattgggaaatctcaaaagccaat
gctactcatgcttacctctctccgaagcatgctaactttgaagagaaggtgtatagtgtt
ccagtaataattaaagacaatggaaaaccacctttggaaagaaaagtggatcttgaagta
agtgtctgcaagtgttcaagtgaaaactggtgtttcatcaacatagagcgtcagcactcc
tggccaaccgtcggccaagcaattgggattctttttggcgtcctgctcatcattggttgc
attgtaggaggcgtgttttttcacatgaagtacaaacagaaaaatgaaaagaagagccac
cagaaagatgtgaaggataggtctgaactcaatagactggcttaa
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