Rissa tridactyla (black-legged kittiwake): 128906272
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Entry
128906272 CDS
T09443
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128906272 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
128906272
NCBI-ProteinID:
XP_054049293
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Position
2:14581708..14696938
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AA seq
522 aa
AA seq
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MAVAAAGGGGGGRAQRSGWLEVLVRERWHKVLANLGGEALVLSGEERPDGAAHNGLGGDG
AACRGAEGGGGAAAVRTAFTDPPEQVPEAVSNKKRCVKVLKQELGGLGISIKGGKENKMP
ILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMRE
ATPYVKKGSPVSEIGWETPPPESPRLGCASADPLSQLSLSIHRDKKTIPLKMCYVTRNMT
VSDPENRLIEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNELIPRVIAEVRDQLGKTG
IAGSREIRHLGWLAEKVPGDNEKHWKPVLVVLTEKDLLIYESMPRMKEAWFSPLHTYPLL
ATRLVHSGPGKGSPQSGVDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSVVQGCHNSA
ELITEITTSCTYKNQECRLTIHYEHGFSLTTEPQDGAFSKIIAQYPYEKLKMSSDDGIRM
LYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcgggcggcggcgggggcggccgggcgcagcgcagcggctggctg
gaagttttggtgcgggagcggtggcacaaagtgctggccaacttgggcggcgaggcgctg
gtgctgagcggcgaggagcgccccgacggggcggcccacaacgggctggggggcgatggg
gcggcgtgccgcggggccgagggcggcgggggggcggcggcggtgcgcaccgccttcacc
gacccccccgagcaggtgcccgaggccgtctccaacaagaagcggtgcgtgaaggtgctg
aagcaggagctgggcgggctgggcatcagcatcaaggggggcaaggagaacaagatgccc
atcctcatcagcaagatcttcaaggggctggcggccgaccagacccaggccctctacgtg
ggcgatgccatcctggccgtcaacggcaccgacctgcgggatgccacccacgacgaggcg
gtgcaggcgctcaagcgggccggcaaggaggtgctgctggaagtgaaatacatgagagaa
gcaaccccctatgtgaagaaaggctctcctgtttcagaaattgggtgggagacgcctccc
cccgagtctccccgcttgggttgtgcctctgctgaccccctgtcgcagctttcgctctcc
atccacagagacaagaagacaataccactcaagatgtgctacgtgacacgcaacatgaca
gtgtcggaccccgaaaacagacttattgaagttcattcacctgatgccaagcacaccgtg
gtgctcaggagtaaggattcggctacagcccaggcctggttcaatgccatccactccagc
gtcaatgagctcatccccagggtgattgcagaggtcagagaccagctgggtaaaacaggg
attgctggaagtcgagagattaggcacctaggttggcttgcagaaaaggtgccgggagac
aacgagaagcactggaagccagtgttagtggtcttgacggagaaagacctcttaatatat
gagagcatgccgcggatgaaggaagcttggttcagccctctgcatacctaccctctgctg
gccaccaggttggtccattctggcccaggaaaaggctcaccacagtccggggtggatttg
tcttttgcaacccgaactggtacaaggcaggggatcgaaacccatctgttcaggacagag
acgagccgagacctgtcactgtggacgaggagcgtagtgcagggctgccacaattctgcg
gagctcatcacggaaatcaccacatcttgcacatataaaaaccaggagtgccgcttgacc
atccattacgaacatggattctctcttacaactgaaccacaagatggtgccttctctaag
ataattgcacaatatccctacgaaaaactgaaaatgtcctcagatgatgggataaggatg
ctttatttagactttggaggaaaggatggagaaattcaactggaccttcattcctgtcca
aaaccaattgtgttcatcattcattccttcctgtcggcaaagattacaagactcggcttg
gtggcataa
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