Rissa tridactyla (black-legged kittiwake): 128906398
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Entry
128906398 CDS
T09443
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128906398 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128906398 (RAD54B)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
128906398 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TusA
AAA_34
Motif
Other DBs
NCBI-GeneID:
128906398
NCBI-ProteinID:
XP_054049591
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All DBs
Position
2:26490793..26559511
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AA seq
917 aa
AA seq
DB search
MRRSAAPSQVLGNVAKKPRFIPPGKSITVCLKNETKEVDQEMKLKEIDEKDGSASLLSKI
YGQNQNGNFTQSVESIGKVKPTKACFSISKCSKMEMKTLNVPKADAVYLPTSGTAKEGAA
QEEPDCLAKYFSVVWCKASKKKHKKWEGDAVLITKGKSVILKDMEGKDIGRGTGYKSKEL
DSLDEGQTLMVGGKEIEVMGVISADDFNSGRCFQAGIGTYDTVTTALSQTNMKPFCKPFK
SVCQSNTKENVLKDSQSCRPRHDPNASNSLVMPRPNASHQWTFNKAGLPMVDVVVDPYIA
NNLRPHQKEGITFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGVYGCKP
VLKRVLIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFSGSPLYSVLIISYEML
LRSLDQIQAIEFNLLICDEGHRLKNSSIKTTTALTSLSCEKRIILTGTPIQNDLQEFYAL
IEFVNPGILGSLSTYRKIYEEPIVRSREPSATKEEKELGEKRAAELTRLTGLFILRRTQE
VINKFLPPKKESIIFCRPTSLQIELYQKLLSSRVIRSCLQGRLENSPHLICIGALKKLCN
HPWLLFRAIKEKSCDPMSDEHDESSLYEGLIDVFPQDYTSDTFSETDSGKLQVLVKLLAA
IHELNSSERVVLVSNYTQTLNVLQETCKRYGYSYTRLDGQTPVSQRQQIVDTFNSKFNPA
FIFLLSSKAGGVGLNLIGASHLILYDIDWNPATDLQAMARVWRDGQKHTVCIYRLLTTGS
IEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSIEELRDLFTLHEDSTCVTHDLLECDCMG
KKDHQNPSSEKPSVSRSCQLGQNHGKPNSKKPLSMSQLMQWKHFSGQHQTLADPFLERIK
ENASFFFQNVTSPTSPT
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatcagcagctccaagtcaagtgctaggaaatgtagccaaaaagccaaggttt
ataccaccaggaaaaagtatcacagtttgtctcaagaatgaaaccaaggaggtggaccaa
gaaatgaaattaaaggagatagatgagaaagatggaagtgcttcattgctttctaaaata
tatggacaaaatcaaaatggaaattttacacagtctgtggagtcaattgggaaagtaaag
cctacaaaagcatgtttcagcattagtaagtgtagcaagatggaaatgaaaacactaaac
gtgcccaaagctgatgcagtgtatttgccaacatcagggacagcaaaggaaggagcagct
caggaagaacctgactgccttgcgaaatatttcagtgttgtgtggtgtaaggcatcaaag
aaaaagcacaagaagtgggaaggcgatgctgttcttattacaaaaggaaagtcagtaata
ttaaaagatatggaaggcaaagacattggaagaggtactggatataaatctaaagagcta
gacagtcttgatgaaggccaaacactgatggttggaggaaaagaaattgaagtgatgggt
gtaatttcagcagatgacttcaacagtggcaggtgttttcaggctggaatagggacttat
gacacagtcacaactgctttatctcaaactaatatgaaaccattctgtaaaccatttaaa
agtgtctgtcaatccaatactaaagagaatgtgctcaaagattctcaaagctgcagacct
cgccacgatccaaatgcttcaaattctctagttatgccaagaccaaatgcaagtcatcag
tggacattcaataaggctggtttacctatggtggatgtagttgtggatccttacattgca
aataacctccgaccacatcagaaagaaggaattacatttctatatgaatgtgtaatggga
atgagagttagcggcagatttggagctattcttgctgatgaaatgggcttaggaaaaaca
ttgcaatgcatcgcccttgtctggactctcctgcgtcaaggggtctatggatgcaaacct
gtactaaaacgagtgctaattgtcacccctgggagtctggtaaaaaactggaaaaaagaa
tttcagaaatggttgggaagtgaaaggatcaaagtctttacagttgatcaggaccacaaa
gtagaagaattcagcggttctccactttattcagttttgataatcagttatgagatgctg
ctgcgatctttggatcaaattcaggctatagaatttaacctcctaatctgtgatgaagga
catcgtttgaaaaatagctctattaagacaactacagccctcactagtctgtcttgtgaa
aagagaattatccttactggtactccaatccaaaatgacttgcaagaattttatgcatta
atagaatttgtgaatccaggaatacttggttctttatccacatatagaaagatatatgaa
gaacccattgtcaggtctagagaaccttcagcaacaaaggaggaaaaggaattaggagaa
aaaagagcagcagaactcacacgcctcactgggctctttattcttaggagaacacaggag
gttataaacaaatttctgccacccaaaaaggagagcataatcttctgccgaccaacatca
ctgcaaattgaattgtatcaaaaactgctcagttctcgagttattaggtcctgtctacaa
ggcaggctagaaaacagtcctcacctaatatgtataggagcgttgaaaaagctttgcaat
catccatggcttctgtttagagctataaaggaaaaaagctgcgatcctatgtctgatgaa
catgatgagtccagtctctacgaaggtctaatagatgtctttccacaagattatacttcg
gacactttctctgaaactgattcaggaaaattgcaggtgctggtgaagttgttagcagca
atccatgagctcaactcttcggaaagagtcgtactggtatccaattacactcagacatta
aacgtattacaagagacgtgcaaacgttatggatactcttatactagacttgatggacag
actcctgtctcccagcggcaacagattgttgatacatttaatagcaaattcaatccagct
tttatctttttgctgagttcaaaggctggcggtgtgggactgaatctgatcggagcatct
catttgatcctgtatgatatcgactggaatccagctacagatcttcaggcaatggccaga
gtgtggagagatggtcagaaacacactgtatgtatctacagactgctaaccacaggctca
atagaagaaaagatttatcaaagacagatcagcaaacaagacctttctggggcagttgta
gacctttccaagacatctgaacacatccatttttccatagaggagcttagagatctcttt
actcttcatgaagattctacctgtgttacccatgacttgcttgagtgcgactgtatgggg
aaaaaagaccatcaaaatccttcctcagaaaagccttctgtatctagaagttgccagctt
ggccaaaaccatgggaagcctaactcaaagaaaccactctccatgtcacagttgatgcaa
tggaaacatttctctgggcaacatcagactctagctgatcctttccttgaaaggataaaa
gagaatgcttctttctttttccagaatgtcaccagtccaacttcccccacctaa
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