Rissa tridactyla (black-legged kittiwake): 128906407
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Entry
128906407 CDS
T09443
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128906407 (KDM1B)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128906407 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_binding_2
Lycopene_cycl
FAD_oxidored
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
KARI_N
NAD_binding_7
ThiF
Shikimate_DH
zf-RING_2
YjeF_N
Attractin
Motif
Other DBs
NCBI-GeneID:
128906407
NCBI-ProteinID:
XP_054049607
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All DBs
Position
2:98340027..98375078
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AA seq
820 aa
AA seq
DB search
MSTGRVRTKKKACSSDQSPDNLPLRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPDCGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNLTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVREMERILYFMTRKGLI
NTGILSVSPDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFKGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHHDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNLPVQSID
YSGEEVQITTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKQSILMSVVTGDAVATIK
NLDDKQVLQQCMTVLRELFKEQEVPEPVKFFVTRWSKDPWLQMAYSFVKTGGSGEAYDII
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAY
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaagggtacgaacgaaaaaaaaggcatgttcttcagaccagtctccagat
aaccttcctctgaggagttctggaagacaggtgaagaagaaagcggctgaagcagcagat
gatgatgatgaagcgtcagagaagaaatatagaaagtgtgaaaaagctggatgcactgca
acatgtcccgtttgctttgccagtgcagctgaaagatgcgctaaaaatgggtatacgtct
agatggtatcatctttcctgtggggaacacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggttatgagaaatatactgcctggaaaaggatttggacaagtaat
ggtaaaagtgagcccagtccaaaagccttcatggctgatcaacagcttccttactgggtg
cagtgcacaaagccagactgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaattgcaaaaacctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccagtgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtta
cctggtgaatccaaccttgtgaagttagagcacttaaagagcgtgcctaatttgactgtt
gcaggcatgaacaaatatttccagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtgaggccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gaccctaccatgtacttggctttgagaaacctgattttggctctgtggtacacaaactgc
aaggaggctcttacccctcaaaaatgtatccatcacatcattgttcgggggcttgtgcgt
atacggtgtgtacgggaaatggagaggatactttattttatgacaaggaaagggctaatt
aatacagggattttatcagtcagtcctgaccagtatcttcttcctaaagaataccacaat
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacaactgcac
aactttggaattaaggtcattgtcttagaagctaaagacagaattggtggccgagtgtgg
gatgataagacattcaaaggagtcactgttggaagaggtgcacaaatcgtcaatggatgt
gtcaacaacccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataagacc
caacatcatgacgttcctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggcatccagttcagtgagctggaagaaaaagtactacagttccacctcagtaat
ttggagtatgcctgtggcagcaatctctctcaggtgtctgcacgctcatgggaccacaat
gagttttttgcccagtttgctggagatcacactcttctaactgtgggatattctactgtg
attgataaattggcagaagggctggacatccggctgaatttgccagtacagagtattgac
tattctggtgaagaagttcagatcactactgcagatggaacagtatggacaacacaaaag
gtattagtgactgtaccgctagcccttcttcagaaaaatgccattcagtttaatcctcca
ctgtcagaaaaaaaaattaaagccattaatagtttgggagcaggagtcattgagaaaatt
gccttgcagtttccttatagattttgggacagtaaaattcaaggagctgatttttttggt
cacgttccacccaattccagccaacgtgggctctttagtgttttctatgacatggatcca
gagggcaaacaaagcattttaatgtcagtggtcactggagatgctgtagcaaccattaag
aatttagatgataaacaagtactgcaacagtgtatgactgtacttcgagagctgtttaag
gagcaggaggttcctgaaccagtgaagttttttgttacccgctggagcaaagacccttgg
ctccagatggcatatagttttgtaaaaacagggggcagtggtgaagcttatgacattata
gctgaagacatacaaggaaaagtttttttcgctggtgaagccacaaataggcactttcct
cagaccgttacaggagcttacttgagtggggttcgagaagcaagcaaaatagcagcatat
taa
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