Rissa tridactyla (black-legged kittiwake): 128906409
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Entry
128906409 CDS
T09443
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128906409 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128906409 (NHLRC1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128906409 (NHLRC1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128906409 (NHLRC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128906409
NCBI-ProteinID:
XP_054049611
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Position
2:complement(98325618..98327282)
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AA seq
396 aa
AA seq
DB search
MAAGMAAAAAKEGEEDEAELSLLECRVCFERYGPGGQRRPRNLPCGHVLCRGCLGALGGP
EGRRLECPFCRRACGPAETSDCLPLLQLLEVLGPAGGSLPSALGRGGGAAGPAPAGLGLR
LSLGGWGSLVNPTGVAACRRSGRLVVAHDGKKRIHVFGPSGSCLQRFGERGDAGNDIKYP
LDVTVTSDGHVVVTDGGDRSVKAFDFEGRGVLAVQEGFCLPWGLDATPESEVILTDSEAG
ALYRLAADFQKGKLKKCQMIRSQLVSPRGVAVSQTSGAIVVIEHLKAQGPSNGSTRVKIF
SAEMDLVGQMDSFGLNLIFPSKIYTMAVAFDKEGRVVVTDVCSQAVICLGKPEEFPIFNP
LISHGLSYPVGLAYMANNSLAVLDSGDHSVKIYSST
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggatggcggcggcggcggcgaaggagggggaggaggacgaggcggagctg
agcctgctggagtgccgggtgtgcttcgagcggtacggccccggcgggcagcggcggccg
cggaacctgccctgcggccacgtcctctgccggggctgcctgggggccctgggcggcccc
gagggccggcggctggagtgtcccttctgccggcgggcctgcggcccggccgagaccagc
gactgcctgccgctgctgcagctgctggaggtgctgggccccgccggcggcagccttccc
tcggccttggggaggggcggaggggcggccgggccggcccccgccggcctgggactccgg
ctgtccctggggggttgggggtcgctggtcaaccccaccggggtggcggcctgccgcagg
tcggggcggctggtggtggcacatgacggcaagaagaggatccacgtcttcgggcccagc
ggatcctgcctgcagcggtttggggagcggggggacgcaggcaacgatatcaagtacccg
cttgacgtgacggtcacctcagatgggcacgtggtggtcaccgatggcggggaccgctcc
gtgaaggcctttgattttgaggggaggggggtcctggccgtccaggaaggtttctgtttg
ccatggggcttggatgccacccccgagagcgaagtcatcctgaccgactcggaggcaggg
gctctctaccgcttggcagccgacttccagaaggggaaattaaagaagtgtcagatgatc
cggtcgcagcttgtcagcccgaggggggttgcagtctcccagacctcgggtgccatcgtg
gtaatcgagcacctgaaagctcaaggaccgagcaacggcagcacccgagtgaagatattc
agtgcagagatggatctcgtcggccagatggatagctttgggctcaacctcattttcccc
tccaaaatatatactatggctgtggcctttgacaaagagggtcgcgttgtagtcacggat
gtctgcagccaggctgtaatatgcttagggaaacctgaggagtttcccatctttaaccct
ctaattagccatgggctttcttatcccgtaggactggcttacatggcaaacaattctctt
gctgtcttagacagtggcgatcattcagtaaaaatatatagctccacctga
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