Rissa tridactyla (black-legged kittiwake): 128906494
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Entry
128906494 CDS
T09443
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128906494 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128906494 (NRXN1)
Membrane trafficking [BR:
rtd04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
128906494 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
128906494
NCBI-ProteinID:
XP_054049656
LinkDB
All DBs
Position
3:12332665..13047752
Genome browser
AA seq
1499 aa
AA seq
DB search
MGAALVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDTAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPVESQEVRLDDEQSRLCAREDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTL
QRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRN
LRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS
PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE
SFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDG
HLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILD
LDDDLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGV
KPSCSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGKSCEREATILSYDGSMFMK
IQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRIN
CNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEFHNIE
TGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVT
FKTKASYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDL
GNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKSDLYI
GGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQ
EDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPSTR
ADRLAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDISIEEINAIIN
DGKYHVVRFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLD
KGRQLTIFNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAENDANIVIEGNVRLVG
EVPSSMTTESTATAMQSEMSTSVMETTTTLATSTARRGKTPTKEPIGQTTDDILVASAEC
PSDDEDIDPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggccctggtgcggcgcgggggctgcctgctgctctggctggccttgctgctg
ggctgctgggccgagctgggcagtgggctggagttcccgggggcggagggccagtggacc
cgcttccccaagtggaacgcctgctgcgagagcgagatgagcttcaacatgaagacgcgc
agctccagcgggctggtgctctacttcgacgacgagggcttctgcgacttcctggagctc
atcctcacccagggcgggcggctgcagctcagcttctccatcttctgcgccgagcctgcc
accctgctctccgacacggcagtcaacgacaacctctggcacgccgtcgtcatccgccgc
cacttcaagaacacgacgctgatcatcgaccgggccgaggccaagtgggtggaggtgaag
tccaagcgtcgggacatgactgtcttcagtggcctcttcctaggggggctgccgccggag
ctgcggtcggcgacgctaaagctgacgctctcctccgtcaaggaccgggagcccttcaag
ggctggataacggacgtccgggtcaactacacgcaggcgtcgccggtggagagccaggag
gtgcggctggacgacgagcagagccgcctgtgcgccagggaggacgtctgcctcaacggg
ggcgtctgctcggtgctcaacgaccaggccgtctgcgactgctcccaaacgggctttcgg
gggaaggactgcagcgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggaaaagaagaatatattgcgacgttcaagggatcagaatacttctgctatgat
ttatctcagaatcccatacagagtagcagtgatgaaataactctgtcatttaaaacactt
cagaggaacggactgatgcttcacacaggaaaatcggctgattatgtcaatcttgcactg
aaaaatggagctgtctccttggtcattaatttgggctcaggggcctttgaagcgctggtg
gaacctgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaagtaaccaggaat
ctgcgtcagcactcaggcattggacacgctatggtaaacaaactacattgttcggtgaca
atatcagtggatggaattctgaccacaacgggatacacgcaagaagactacaccatgctg
ggctctgatgactttttctatgttggaggcagtcctagcacagcagacctcccagggtca
ccagtcagtaacaactttatgggctgtctcaaagaggttgtatataaaaataacgatgtc
aggttggagttatctcgacttgccaagcaaggagatcctaaaatgaagattcatggggtt
gtagcatttaaatgtgagaatgttgcaaccttagatccaatcacatttgaaacaccggag
tctttcatctctttgccaaagtggaatgccaagaaaacaggctcaatatcatttgacttt
cgtacaactgagccaaatggcctgattcttttcagtcatggaaaaccaaggcaccaaaaa
gatgccaaacacccacagatggtgaaggttgacttttttgccattgagatgcttgatggc
cacctctacctgttgttagacatgggatcaggtactataaaaataaaagccttgcagaag
aaggtgaatgatggtgaatggtaccatgtggattttcaacgggatggacggtcagggacc
atatctgtgaacacattacgtacaccatatactgcaccaggggaaagtgaaatccttgac
ttggatgatgacttgtatcttggaggcttaccagaaaataaagcaggcctcgtcttccca
acagaggtgtggacagcacttctcaattacggatacgtcggctgcattagagatttattt
attgatggtcaaagcaaagatattcgacagatggctgaaattcaaagtacagctggagta
aaaccctcatgctcaagagaaactgcaaaaccttgccttagcaacccctgtaaaaacaat
ggtgtatgcagggatgggtggaacagatatgtttgtgattgctctggtacggggtacctt
ggcaaatcgtgcgaaagagaggcaacaattttaagctacgatggaagtatgtttatgaaa
atacaactccctgttgtgatgcatacagaggctgaagatgtctctttacggttcaggtct
cagagagcttatggcattttaatggcaactacttctagggaatccgcagatacccttcgg
ttagagttggatgcaggacgagttaaactaacggtcaacctagactgtatcaggattaac
tgtaattccagcaaaggtccagaaaccctttttgctggctataacctcaatgataatgag
tggcacacagtgcgtgtggttcggcgaggaaaaagtttaaagttaatggtggatgaccag
caagccatgacaggtcaaatggctggtgatcacacacggctggaattccacaatatagaa
acaggaataataacggagcgacgctacctgtcttctgtgccttctaatttcattgggcat
ctacagagtcttacatttaatggcatggcatacattgacttatgtaaaaatggagacata
gactattgtgagctaaatgcaagatttggattcaggaacatcatagcagaccccgtaaca
tttaaaacaaaagcaagttatgttgcattggccacgctacaagcatatacatctatgcac
ctttttttccagttcaaaacaacctctctggatggattgatactttataacagtggcgat
ggaaatgatttcattgtggttgaattagtaaaagggtatttacactatgtgtttgacttg
ggaaatggtgcaaatctcatcaaaggaagttctaataaacctctgaatgacaaccagtgg
cataatgtgatgatatcaagggataccaacaatctccacactgtaaagattgacactaaa
atcacaacacagagcacagcaggagccagaaatttagatcttaaaagtgatttgtatatt
ggaggagtggccaaagaaatgtataagtcattgccaaaactggtgcatgcaaaggaggga
ttccaaggctgtcttgcatcggttgacttgaatggacggctccctgatctaatctcagat
gctctcttctgcaatgggcaaatagaaagaggatgtgaaggccccagcacaacgtgccaa
gaggattcgtgtgcaaaccagggagtgtgcttacagcagtgggatggattcagttgtgac
tgtagtatgacctcctttagcggaccgttgtgcaatgacccgggaacaacgtatatcttt
agtaaaggtggtggacaaatcacgtacacgtggcctcctaatgatcggccaagcactcgt
gcggacagactggcaatagggtttagtactgttcaaaaagaagccgtgttggtacgagtg
gacagttctactgggctcggagattatttagagctgcatatccaccagggaaaaattgga
gttaaatttaatgttggaactgatgacatctctattgaagagatcaacgcaatcattaat
gatggaaaataccatgtagtacgtttcacgagaagcggtggcaatgccacattacaggtg
gacaactggccagttatcgaacgttacccagcaggaaacaatgataacgagcgcctggcg
attgctagacagcgaattccatatcgacttggtcgagtagttgatgaatggctactcgac
aaagggcgtcagctcacaatcttcaatagccaagcaaccataaaaattggaggcaaggaa
cgtggccatcctttccaaggccagctctctggtctttactacaatggcttgaaagttctg
aatatggcagcagaaaatgatgccaacatcgtgatagaaggaaatgtgagacttgttggt
gaagtgccttcctctatgacaaccgagtccacagccacagcgatgcagtctgagatgtcc
acgtcagtcatggaaacaaccaccactttggccacgagcaccgctagaagaggaaagacc
ccgacaaaagaacctattggccagaccacagatgacatcctggtggcctcggccgaatgt
cctagcgatgatgaggacatcgatccctgtgagccgagctcaggtgggttagcaaatcct
accagggcaggaggaggaagggagtaccctggctcgtccgaggtgattcgtgaatccagc
agcacgacaggcatggtagttgggatcgtggcagcagcggcgctgtgtatcctcattctc
ctgtatgctatgtacaagtacaggaatcgagacgaaggatcgtatcacgtagatgagagt
cgaaactacatcagtaactcagcacaatccaatggggctgtgatcaaggaaaaacagccc
aacagcgctaaaagttccaacaaaaacaagaaaaataaggataaggagtactatgtctga
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integrated database retrieval system
