Rissa tridactyla (black-legged kittiwake): 128906495
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Entry
128906495 CDS
T09443
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128906495 (TRERF1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
128906495 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
zf-C2H2_2
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
128906495
NCBI-ProteinID:
XP_054049686
LinkDB
All DBs
Position
3:complement(26468068..26567017)
Genome browser
AA seq
1167 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQQHQMNSLPSLNHSYGTSVMDASQASPLSPQFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHVPVRNNLNNQSAMWSPLGQGESHDGYQYSYS
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNAGDSALRQLL
SQKPAVEQQPVTSTVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQTHVQQMQSQQLLPQQMQHLQQTQYYAQPQQGHQRLSIQEIQQQQQQPTRQQQQ
RQCPMQIAQYYQTQPVMQQLQQQQQQMQLPLPPYHREHDPKTMHEPHQYPQDPSHPVQLI
QLGAVPQYCYQDPHEQYRHLYPQSLLPQQDQQKQYPSESRAPSLNSHVGLTPPETTEDPA
RQEINSVGNAGPHRTLLPPSGVHLNNKSSQQDSPSAAWPQQVQLSDGRLQPLSPEQSGQN
RETLPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPK
EVDSLAPIVMPVSVPVKLLSPEPSTQPSASSATVKDKPANSVSDDEMPVLVKMTCSPPCS
PKVANPCSSSEISKKPHQSAVKLEESFKPLQDKKKYRHRPEPLFIPPPSFNFSMSHSGAT
LYQSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHTQLPLT
PLTPTPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVH
KATLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEK
LLLRKPLRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCV
EYYYTWKKILRLGRKHRTRLEKKREECLTSGEEEVLEEDEETEEDRKEEREMQKSPDPPA
IPLVGPIDLPSLQSLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCTIP
GTKQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGRVFFKIKSRNAHMKTHRQQE
EQQRQKAQKAAVAAEMAATIARTTGPAGHSLIPLDHMNLVKHVENVGDIDDDVVQELGGV
MEENEVMDADLLLDDEDADLLQDDAEL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaatgagaacttgtac
taccaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgcctcccaagcatcccctctctccccccagtttccccaagattcaagagacagt
atagctttgcctgtaggttcaaaaagtcttgggtcaatggatacatctagacaaaccagt
tggacgcattctggctcaggaaaccatgtcccagtgcggaacaatttgaataatcaaagc
gcaatgtggagccccctcgggcagggggagtcccacgacggataccaatattcttactct
caacccagtgaaaatcgatcacaaaaaattaccagtggggtcctgcataaattggactcc
tttacacaagtatttgctaaccaaaatctgaggattcaagtcaacaacatggctcaggtt
ttgcacacggagtcttcgatggtggataatgctggtgacagcgcgctcaggcagctgctg
tcccagaagccagcggttgagcaacagcctgtaacttccactgtacaaagatatcaacca
gtgccacagcaaacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcatttatcacaaatgcagatgcat
tcggcgtttcagcaaggacagacgcacgtccaacaaatgcagtcccagcagctcttaccg
cagcagatgcagcacttgcagcagactcaatactacgctcagccgcagcagggacatcag
cggctctcgatacaggagatccagcagcagcagcaacagccaactcggcagcagcagcag
cggcagtgtccaatgcaaatagctcagtattaccaaacgcaacctgtcatgcagcagtta
cagcaacagcagcaacagatgcaattgccgcttcctccgtatcacagggaacacgatcca
aagactatgcatgaaccgcaccagtaccctcaggatccaagtcatcctgtgcagcttatc
cagttgggagcagtgcctcagtattgctaccaagacccacatgaacagtacaggcacttg
tacccgcagagtttactgccgcagcaagatcagcagaagcaatacccaagtgagagcaga
gcaccatctctgaactcccacgttggcctcactccaccagagaccacggaggatcccgca
cggcaggagatcaattctgtaggtaatgctggccctcatcgaactcttttgcccccctcg
ggagttcatctgaacaacaaaagctctcagcaagactctcccagcgccgcgtggcctcag
caggtgcaactgtcagatggcagactgcagccgctctccccagaacaaagtggccagaac
agagaaacacttcctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttg
aaggagtttaagagtttgcctgctctgaatggtcacatgaggtcacacggaggagtaaga
gcatctcctaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgcctaaa
gaggtggatagcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtca
cctgagcccagcacgcagccctctgccagctctgccacagtcaaagacaagcctgccaac
tctgtgtcagatgatgagatgcccgttctcgtgaagatgacttgctctccaccgtgcagt
ccaaaagtggccaacccctgctcatcctctgaaattagcaaaaaacctcatcaaagtgct
gtaaaattggaagaaagcttcaaaccattgcaggacaagaagaagtatcgacacagaccc
gaacctctcttcatacctcctccttccttcaacttcagcatgtctcactccggtgccacc
ctgtaccagagtcagcttcgctctccccgtgtcctcggagatcatctgctagaccggaca
catgagctcccaccctacactccaccaccaatgcttagtccagttcggcaaggatctggt
ctcttcagtagtgttatcacatcatctcatagcacctcacatactcagctgccacttact
ccactgacacctactccacgggtgctcctgtgtcggtctaacagtattgatggaagtgtc
attccagtgacgccggggcctggagaacagactgttgaacctcgaatcaatattgggtcc
aggtttcaggctgatattcctgagctgcaggacagattgctaatggagaaagatgtgcat
aaggctactttggtgtggaaaccgtggccggaactggagaacaaagtcttccaacaaaga
gtggaagaccttctaaatatgagctgttccagtgtgttacctggtggaggaactaactca
gaatacgctttgcactctctctttgaagcgaaaggagatattatggttgctcttgagaag
ctgctgttgagaaagccactgagattgaagtgtcaccctttggcaaattaccactacgcc
ggctccgacaaatggacgcatcaagaaaggaggctgttcaaagaggcattatccacctac
agtaaagatttcatatttgtacagaaaatggttaagtctaagacggttgcacagtgtgtg
gaatactactatacctggaagaaaatcttgcgtttgggacggaaacacagaacacgttta
gagaaaaaaagagaggaatgcctgacaagtggagaagaggaagtgttagaggaagatgag
gagacagaagaagacagaaaggaagaaagggaaatgcagaagtctcctgacccaccagct
atccctcttgttggacctatagatctgccttcccttcagagtctttcactttcttcgtcc
tccttcatctgtgaaatgccaaactgtggcgctgtgttcagttcccgacaagcgctaaat
ggccatgctcgcattcatggaggtacgaatcaggtgacaaaaacacgatgcaccattcca
ggcactaagcagaaatctggtacgcagagcgggtactgctccatcaagagttcacctgcc
catagcacaacaagcggtgagaccgacccgacaacaatctttccttgcaaggagtgtggc
agggtatttttcaaaatcaaaagccgcaatgctcatatgaaaactcacagacaacaagaa
gaacagcagaggcagaaggctcagaaagctgctgtggcagcggaaatggcagccactatt
gcaagaactactgggccagctgggcatagtttgatccctctggatcacatgaatttggtt
aaacatgtggaaaatgtcggtgacattgacgacgatgttgttcaggagctgggtggtgtc
atggaagagaatgaagtcatggatgctgaccttttattggatgatgaagatgcagatcta
ctgcaggatgatgctgagttgtaa
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integrated database retrieval system
