Rissa tridactyla (black-legged kittiwake): 128906553
Help
Entry
128906553 CDS
T09443
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128906553 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128906553 (TGFBRAP1)
Membrane trafficking [BR:
rtd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128906553 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
128906553
NCBI-ProteinID:
XP_054049893
LinkDB
All DBs
Position
1:71121668..71164767
Genome browser
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYVGTNDCFIYHFLLDEKISTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMMNLEPVPTGAKIKGAVT
FAVNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALILAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLIFCSDQDL
VWKYSEWVLQKNEEVGVQIFTKRPLEEQEKNNINPDDIISCLNKYPKARVKYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSVTADKCTETTELLLKLRNLLQKSDLYRIHFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCIWNSENRDMQYRRRLFHMLLS
VYLNPGAPDCALVMAAVDLLNNHAAEFDAAVVLQLVPDSWSVQLLSPFLAGAVRQSIHTK
RMTQVALGLAQAENLIYKYEKVKQKGTPILLSDKMVCQVCQNPFCEPVFVRYPNGGMVHT
HCAANRHLNSNTTHHSSSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaagctttcaagctcgtttctgctgtggagcgggagatgttaatgggagac
aaaaattacatcaacatcgaatgcattgagtgctgtggaaagaacctttatgttggaacc
aacgactgctttatctatcactttctgttggacgaaaagatatcaacagcgggaaaaata
acttttgctgccactaagcaactacataaatacctgggcttgaagaagcctgtgagtgag
ttaaaagcagcctctgccctcaccaggcttcttgtgctttgcgacaacacaataacacta
gttaacatgatgaacttggaacctgtccccactggtgctaaaatcaaaggagctgtgaca
tttgcagtaaatgaaaaccctgtgagcggggatcctttctgcgttgaagtctgcattatc
tcggtcaagcggcggaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttattacttatgt
cttgcacttactacgcagtatatcattttaaattacaatactggcgtctcccaggatcta
tttccttattgcagtgatgagaaacgaccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccccggaggcctaggcatgtttgcaactgtagacggcatttctcagcgt
gcccctgtgcactggtcagagaacgtgattggagcagctttgtgctttccttacgtggtt
gctctcgatgatgagttcattacagtgcacagcatgctggaccagcagcaaaagcaaacg
ttgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aataagggtgtgtatattttggtgccactacctttggaaaaacagattcaagatcttcta
gctagccacagagtggaagaagcccttattctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaacttttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatacggtctcat
ccccctctgcatgagtacgcggacttaaaccagctgacccaaggggaccaggagaagatg
acaaagtgcaaacgattcctcatgagttacttgaatgaagtccgcagcactgaggtcgcg
aatggctacaaggaagatattgacacggctttactcaagctctatgccgaggcaaatcat
gaaagtctgctggatctgctggtttcagagaacttttgtcttttaacagatagcgccgcc
tggctggaaaaacacaaaaagtattttgctcttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagttgatggagacattcaagattctaca
cgttcagatctctatgaatatatagtagacttccttatattctgctcagaccaagatcta
gtgtggaaatactctgaatgggttttacagaaaaatgaagaggttggcgtacagatattc
accaaaaggcctttggaagaacaggagaaaaataacattaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgttaaatacctagaacatctagtgttggaaaga
aaaatagagaaagaaaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgtgaccgcggataagtgtacggaaacaactgaactgctgttgaaacta
cgcaatcttcttcagaaatctgatctttacagaattcactttattttggacaaaatccag
ggcacagaccttcatatggaaagtgcaattttatatggaaaactagaagaacatgagaag
gctttgcatatccttgtccatgagttaaaggacttccatgctgctgaagaatactgtata
tggaactctgagaacagagacatgcagtacagacggaggcttttccatatgctgctgtca
gtgtatctaaatccaggcgctccggattgtgcactagtcatggctgctgtggatctcttg
aataaccatgctgctgagtttgatgcggctgtagttttgcagctagtgcctgacagctgg
tcagtgcagctcctctccccgttcctggctggagcagtgaggcaaagcattcatacaaaa
agaatgacgcaggttgcacttgggttagcacaagctgaaaacttaatctacaaatacgag
aaggttaagcaaaaaggaaccccaattcttctttcggacaaaatggtctgtcaggtgtgc
cagaatcctttctgcgagcctgtatttgtaagatacccaaatgggggtatggtccacaca
cactgtgctgcaaacagacatctgaattcaaacacaactcatcactcctccagctccagc
aatcagacttga
DBGET
integrated database retrieval system
