Rissa tridactyla (black-legged kittiwake): 128906557
Help
Entry
128906557 CDS
T09443
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd03015
mRNA surveillance pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128906557 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
128906557 (EIF4A3)
03015 mRNA surveillance pathway
128906557 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128906557 (EIF4A3)
03041 Spliceosome [BR:
rtd03041
]
128906557 (EIF4A3)
03009 Ribosome biogenesis [BR:
rtd03009
]
128906557 (EIF4A3)
03012 Translation factors [BR:
rtd03012
]
128906557 (EIF4A3)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128906557 (EIF4A3)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128906557 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
128906557 (EIF4A3)
Spliceosome [BR:
rtd03041
]
Complex C
Other components
EJC/TREX
128906557 (EIF4A3)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
90S particles
Helicases
128906557 (EIF4A3)
Translation factors [BR:
rtd03012
]
Eukaryotic type
Initiation factors
eIF-4
128906557 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
128906557
NCBI-ProteinID:
XP_054049903
LinkDB
All DBs
Position
3:complement(18345614..18353274)
Genome browser
AA seq
436 aa
AA seq
DB search
MRSREVSRSAAAAASAVCEGKASAMSGSAGSGGAAGSARKRLMKEEDMTKVEFETSEEVD
VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS
VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY
GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV
LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL
TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTD
VWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQY
YSTQIDEMPMNVADLI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgggaagtctcgcggagcgcggcggcggcggcatcggcggtgtgtgagggg
aaggcctcagctatgtcggggtcggcggggtctggcggggcggccggctcggcgcggaag
cggctgatgaaggaggaggacatgacgaaggtggagttcgagacgagcgaggaggtggac
gtgacgcccaccttcgacaccatggggctgcgggaggacctgctgcgcggcatctacgcc
tacggttttgagaagccctcggccatccagcagagagccatcaagcagatcatcaagggg
agagacgtgatcgcccagtcacagtcaggaaccgggaagacagcaacgttctccatctct
gttctgcagtgcctggatatacaggttcgtgagacccaggcgttgatcttggcaccaact
cgggagctggctgtacagattcagaagggtcttcttgctctgggagactacatgaacgtc
cagtgtcacgcctgcattggagggaccaacgtgggtgaagatatcagaaaactggattat
gggcagcatgttgttgctggcactccaggccgtgtgtttgatatgattcgtcgtcgaagt
ttaaggactcgtgccatcaaaatgttggttttggatgaagcagatgaaatgctcaataaa
ggttttaaggagcagatctatgatgtgtacagatacttgcctccagctacacaggtggtt
ctgatcagtgccactttgcctcatgaaattctggagatgaccaacaaattcatgacagac
cccattcgcatcttggtgaaacgtgatgagttgaccctcgaaggaatcaagcagtttttt
gtggccgtggagagggaagaatggaagtttgacaccttgtgcgatctctacgacacactc
acaatcacccaggctgtcatcttctgcaacaccaaaagaaaggtagactggctcacggag
aagatgagagaagccaacttcacggtttcgtccatgcatggggacatgccacagaaggag
agagagtccattatgaaagagttcagatctggcgcaagccgagtccttatttcgacagat
gtttgggccagaggcctggatgttcctcaggtgtccctgatcattaactacgacttaccc
aacaacagagaactctacatacacagaattggccggtcgggcagatacggccgaaaaggt
gtagccatcaactttgtgaagaacgatgacatccgcatcctgcgagacatcgagcagtac
tactccacccagatagatgagatgcccatgaacgttgccgatcttatctga
DBGET
integrated database retrieval system
