Rissa tridactyla (black-legged kittiwake): 128906610
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Entry
128906610 CDS
T09443
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04517
IgSF CAM signaling
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128906610 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128906610 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128906610 (SPTBN1)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128906610 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
128906610 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128906610
NCBI-ProteinID:
XP_054050067
LinkDB
All DBs
Position
3:complement(7966545..8102543)
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHESIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEGVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLIVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSKNIITESSPNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTSDRKAKTAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattatgacaatattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggacgttgatgactgggacaacgaaaatagttctgctcgtctgttt
gaacgatcccgcatcaaggccctagctgatgagcgtgaggcagttcagaagaagactttc
acaaagtgggttaattcccacttggcacgcgtatcatgcagaattacagacctgtacact
gaccttcgcgatggaaggatgctcatcaaacttctggaagttctttcaggagagagactt
cctaaaccaactaagggaaggatgcgcatccattgcctggagaatgttgataaagccctc
caattcctgaaagagcaaagagtgcatctagaaaacatgggatctcatgatattgtggat
gggaatcacagactgacgcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaaccgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaactttaccaca
agctggagggacgggatggctttcaatgcactaatacataagcacaggcctgacctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtctcactaagctcctggaccctgaggatatcagtgttgatcat
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaacg
gagaagatgattgaaaaatacgaatcgctggcttctgaccttcttgagtggatcgagcaa
accattatcatccttaacaatcgcaaatttgccaactcgctagttggtgtgcaacagcag
ctacaggcattcaacacttaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctagaggtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggataattttggctttgaccttccagcagtagaggccgca
acaaagaagcatgaggccattgaaacagatatcgcagcatatgaagaacgagtccaggcc
gtggttgcggttgcaaaggagcttgagactgaaaattaccatgatatcaagcgcattact
gcaagaaaggacaatgttatacgcctatgggagtatctcctggagctgctcagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctgtatatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacatttg
ttaggagttgaagacctgttgcagaaacatgctctggtggaagctgacattgctattcaa
gctgagagagtgagaggagtcaatgcatctgctcagaagtttgccaccgatggagaaggt
tacaaaccatgtgacccgcaagttatcagggaccgtgtcgctcacatggagttctgttac
caagagctctgccagctcgcagccgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtacgtctcttgagtaaacat
aaggcatttgaagatgaaatgagtggtcgtagtggccactttcagcaggcaataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaaaatccgagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgccattaggaagaagcgtctg
gaggaagcctctctccttcaccagttccaggctgacgctgacgacattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccatgatgaatattccactcaa
tccttggtcaagaaacacaaagacgtggctgaagagattgcaagctaccggccaactatt
gactcgcttcatgaacaagcaaaggccctaccacaggaacacgccggatctccagatgtg
caaggtagattgtccggaatagaggaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataagatgttcagcgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttagaaccagaaatgaataat
caggcatcccgtgttgcagtagtgaaccaaattgctagacagctaatgcacagcggccat
ccaagtgagaaggagataaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgagtgtaatgaaaccaaatcttggatcagggaaaagaccaaagtgattgaatcc
acgcaagatttgggtaatgatctagctggagtgatggccctgcagaggaagctgacgggc
atggaacgtgatctggtagccattgaagccaagctaagcgacctgcaaaaagaggcagaa
aagctggaatcagagcatcctgaccaggcacaagccatcctttcacggctcgcagaaatc
aacgatgtatgggaagaaatgaagaccaccctcaagaatcgggaagagtccctcggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcaattgcatccgaagatatgccaaacacactgacggaggctgagaagctg
ctcactcaacatgagagtattaagaatgaaatcaacaattatgaggaagattatcagaaa
atgagggacatgggtgagatggtgacacaagggcaaactgacgctcagtacatgttctta
cgccagcgcctacaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtcgcatgcctaccagctatttctcagagataccaagcaa
gcggaagcatttcttaataaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagccgctattaaaaaacaggaggatttcatgaccacaatggatgcc
aatgaagaaaagatcaatgcagttgtagagactggccggaggctagttagcgacgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataaccgggatcttcaaaagttt
cttcaggattgtcaagagctctcgctctggatcaatgaaaagatgctcacagcccaggat
atgtcctatgatgaggcaaggaacttgcatagcaagtggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctagagaagattgaaaaggagggaatgcagctc
attgcagagaaaccggagactgaaggtgtagtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagcttgaatccactacccagaccaaagctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agtcaaattcagtcggatgactacggaaaagatctcaccagcgtcaacatcctgttgaag
aagcagcagatgctagagaatcaaatggatgttcgtaagaaggagatagaggagctgcaa
agccaggcaagggctttaagtcaagaagggaagagtacagatgaagtagatggcaaacgc
cttattgtagaaaagaaatttttggaattattggaacctttgaatgaaagaaaggcaaac
ctgctggcctccaaagagatccaccagttcaatcgggatgtggaagatgaaattttgtgg
gtcggagaaaggatgcctatagctacatctactgatcatggacacaacctccagactgtg
cagctactgataaagaaaaatcagacccttcagaaagaaatccagggacatcagcctcgt
atcgatgacatttttgagaggagtaaaaacattatcacagagagtagccctaatgctgaa
gcaattcagcagagacttgcagacttgcagcagctgtggaatctcctaatcgaggagaca
gagaaacgccacaagcgcctagaggagtctcacagagcacagcagtattactttgatgct
gccgaggctgaggcatggatgagcgagcaagagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgta
gaagactatgctgaaactgtgcatcagctttcaaagaccagcagaactttagtggcagat
aatcacccagaaagcgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatcttgctgaagagaggcggggcaagctggatgagagacacaggctgttc
cagcttaaccgcgaggtggatgatctggagcaatggattgctgaaagggaggtggtggca
ggatcccacgagctgggacaggattacgaacatgtaacaatgctacaggagcgattccga
gaatttgcccgagacactggaaacatcggacaggagcgtgttgatactgttaaccacatg
gcagatgaactcatcaactctggacattcagatgctgcaacaattgcagagtggaaggat
ggactcaatgaggcctgggctgatctcctagagctcattgacacgagaacacaaattcta
gcagcctcttatgaactgcacaaattttaccacgatgccaaggagatcttgggacgtatt
caagacaaacataagaaactacctgaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacgtttgagcatgatatccaggcgcttggcacccaggtgaga
cagctgcaggaggatgctgcgcgccttcaggctgcctatgccggagacaaagccgatgac
atccagaaaagggaaaacgaggtcctagaagcatggaaggcactgttggatgcctgcgag
ggacgcagggtgagactggtggatacaggagacaaattccgtttcttcagcatggttcgt
gatctcatgctttggatggaagatgttatccgacagatagaagcccaagaaaagccaagg
gatgtttcgtctgttgaactactaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccgaaacgacagctttactacctgcattgagcttggcaaatctcttctggcaagaaaa
cactatgcgtcagaggagatcaaggagaagctgctgcagctgacggaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttttcaagagatgcaagtgtcgcggaggcctggctgctgggacaggagccctacctgtcc
agtcgtgaaataggtcaaagtgttgacgaagtggaaaaattaattaagcggcatgaagca
tttgaaaaatccgcagctacttgggatgagagatttgcagcactggagagactgaccacg
ttggaactgctggaagtacgtcgacagcaagaggaagaggagaggaagagacagccgccc
actccagagccaagcccaaaggttgcagaggatgccgactcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaacggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaacgaaatggtcaatggagctgcagaacagaggacaagttca
aaagagtctagtcctgttccttctccaacgtcagaccgcaaagccaagaccgccattcag
gcacagactgctgctaccctaccagccaaaacacaagagattccttcagctcagatggag
ggcttcttacatcgcaaacacgaatgggagacacacagcaagaaagcctcgagcaggtca
tggcataacgtgtattgtgtcataaacaaccaagagatgggcttctacaaggattcgaag
gctgctgcttctggcatcccctaccacaatgagattcctgtcagcttgaaagaagcagtc
tgtgaaatagcggtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacgtcagctatctcttctgataaaatcgaagtgtccccgactacccagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccct
ggcaagcgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
