Rissa tridactyla (black-legged kittiwake): 128906808
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Entry
128906808 CDS
T09443
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128906808 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128906808 (PEX6)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
128906808 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
nSTAND3
AAA_25
RuvB_N
Vps4_C
DUF815
TsaE
NPHP3_N
RNA_helicase
AAA_33
bpMoxR
PEX6_4th
TIP49
Parvo_NS1
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
128906808
NCBI-ProteinID:
XP_054050704
LinkDB
All DBs
Position
3:10338453..10356175
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AA seq
982 aa
AA seq
DB search
MAVAVLRPLEAPPAELAPVTALLLAPPPLCSALRGRGGSGEGLVLAVRPAGRGGAQAVLL
SAVALEAGGRRGAELWLRGALVRRLGLAAGRRVAVWPVRRPPPLAWVLLGAAGRAGRPAG
GAVLVRRGEALPGAGPGPGPLVLEARPALQGLLGNGTRTALAPPPPPQREPAAGSAPCRP
RPAAPPLVSSFAAAGPGGEAAAVGLRAAPGGGAGGGAEVWVSRRGLLALGLFQGEWVRVG
AEGAARRHLAALLARPPAWEYPRAARRGPPDGAALLAPALAFNLGCDPAAAANLRLQRYE
RSGAAGGKGSRSVLSVPPFAKELHLEIVCSPAYSARGGYDRLLYKHFKTPRLVQEGDILC
VPTFGYAEFLEVNADKFLRWPELYFKARKILGMGEGEQSEGYLVDTQNTSVYLAGSTNSA
VPSAPAYNSHEFWSSLSPAGLSDVVKQLCDTLRPHLNSPASALSAAGSVLLSGPSGSGKL
MAVRAVCSCLNLHLFKVDCVSLCSDTSGATEEKVQMAFTQAQQYHPCVLLLKDIEVLGRD
RDRLGEDARVIATLRQLLLDRDPSLSHVVLVIATTCKPQDVPTDVQTAFLHEVKIEAPSE
EQRRSMLSMLTAGLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGG
LSEEVERDFCTAGFPVLEEDFSVALDQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEIL
DTIQLPLEHPELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCAMTFLSVKGPELINMYV
GQSEENVRNVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHS
TREVFVIGATNRPDLLDPALLRPGRFDKLVYVGINEDRESQLQVLSAVTRKFKLDPSVNL
TTILEKCPAQLTGADIYALCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDFLQAAARL
QPSVSEQELLRYRLIQQKFAAC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgctgcggccgctggaggccccgccggcggagctggcgccggtcacc
gcgctgctgctggctccgccgccgctctgctcggcgctgcgcgggcgaggcggcagcggt
gagggcctggtgctggcggtgcggccggcggggcgcggcggggcgcaggccgtgctgctg
agcgccgtggcgctggaggcggggggccggcggggcgccgagctgtggctgcgcggggcc
ttggtgcggcggctggggctagcggccggccggcgggtggccgtttggccggtgcgccgc
ccgccgccgctggcctgggtgctgctgggggcggcggggcgggcggggcggccggcgggc
ggcgcggtgctggtgcggcggggggaggcgctgccgggagcggggccggggccgggtccg
ctggtgctggaggcccggccggcgctccaggggttgctaggcaacggcacgcgcaccgcc
ctcgcgcccccgccgccgccccagcgcgagcccgccgccggcagcgccccctgccggcct
cgccccgccgctccccccctcgtctccagtttcgccgccgccgggcccggcggggaggcg
gctgccgtggggctgcgggcggcccccggcggcggggcgggcggcggggcggaggtgtgg
gtgagccggcgggggctgctggcgctggggctgttccagggggagtgggtgcgggtgggc
gccgagggggcggcccgacgccacctggcggccctgttggcccggccgccggcctgggag
tacccgcgggccgcccgccgcgggccgcccgacggcgccgccctgctggcccccgcactg
gccttcaacctgggctgcgaccccgccgccgccgccaacctccgcctgcagaggtacgaa
cggtccggcgctgcaggtggaaagggcagccggtccgtgctgtccgtgccccccttcgcc
aaggagctgcacctagagatcgtctgctcgccagcctacagcgcacgggggggctacgac
cgcctcctctacaagcacttcaaaacgccccggcttgtccaggagggagacatcctatgt
gttccaacatttggatatgctgagtttttagaagtaaatgcagacaaattcctaaggtgg
ccagagctttacttcaaagcgaggaaaatcttaggcatgggggaaggcgagcagtctgaa
ggttacctggtggacacccagaacacctctgtctatctggcgggctcaacaaacagcgct
gtcccatctgccccagcctataacagccacgagttctggagcagtttgtctcctgctgga
ctttctgatgttgtgaagcagctctgtgacactcttcggcctcatctgaacagtccggca
agtgcactgagcgcggctggcagcgttctcctctcagggccaagcggcagcgggaaactg
atggctgtcagagctgtgtgtagctgcctcaacctccacctgttcaaggttgattgcgtt
agtttgtgcagtgacaccagtggagccacagaggagaaagtacagatggccttcacccag
gcccagcaatatcatccgtgtgtgctcctgctgaaagacatcgaggtgcttggcagagac
cgggacaggctaggagaggacgccagggtcatagctactctgagacagctgctcctggac
agagacccatcactgagccatgttgtcctggtgattgccacaacctgcaaaccccaggat
gttcctacagacgtgcagactgctttccttcacgaggtgaaaattgaagccccttcagaa
gagcagaggaggtcaatgctgagcatgctgactgctggtctgcctctgggcaaagaagtg
agcctgtccaagctggcccgcaggactgcaggttttgtgctgggagatttctgtgccttg
ttgtcccacagcagccgggctgcttgtacccgcatccaggccttgagttttccaggcgga
ctgagcgaggaagtggagagagatttttgcactgctgggttcccggtgcttgaggaggat
tttagcgttgcgctggaccagctgcacgatgcccattcacaggcagtgggagccccgaag
ataccgtccgtctcctggcaggatgttggtgggctccaggaggtgaagaaggaaatcctg
gacactatccagttgcccctggagcacccggagctgctgtcactgggtctgtgccgctct
ggtctgctgctgtatgggcctccagggacagggaagaccttgctggcaaaagccgtggca
accacatgcgccatgacgttccttagcgtgaaagggccagagctgatcaacatgtacgtt
gggcaaagcgaggagaatgtgcgtaacgtatttgccagagccagggcagctgctccatgc
attatcttttttgatgaactggattccctggcccccagtcgtgggcggagtggagattca
gggggcgtcatggacagagttgtctcgcagctcctggctgagcttgatggccttcattcc
accagagaggtatttgtcattggagctacgaacaggcctgacctcctggacccagctctg
ctccggccgggcaggttcgacaagctggtctatgtgggcataaacgaagaccgggagtcg
cagctgcaggtgctgagcgccgtcaccaggaagtttaaactggatccttccgtgaatctc
accaccatcctagaaaaatgcccggctcagctgacaggagcagacatctatgccctgtgc
tcggatgccatgatgtgcgctgtcaaacgcaaggtggaatggatcgaggaagggctggac
accgagagctctgctctgatcctgaccatggaagacttcctgcaggctgctgcgaggttg
cagccgtcagtctctgagcaggagttgctcaggtacagactcatccagcagaagtttgct
gcctgctaa
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