Rissa tridactyla (black-legged kittiwake): 128907110
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Entry
128907110 CDS
T09443
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
rtd03083
Polycomb repressive complex
rtd04110
Cell cycle
rtd04330
Notch signaling pathway
rtd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128907110 (HDAC2)
03083 Polycomb repressive complex
128907110 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128907110 (HDAC2)
04350 TGF-beta signaling pathway
128907110 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128907110 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128907110 (HDAC2)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128907110 (HDAC2)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
128907110 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
128907110 (HDAC2)
BRAF-HDAC complex
128907110 (HDAC2)
REST complex
128907110 (HDAC2)
SHIP complex
128907110 (HDAC2)
MiDAC complex
128907110 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128907110 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128907110 (HDAC2)
Chromatin remodeling factors
NuRD complex
128907110 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
128907110
NCBI-ProteinID:
XP_054051526
LinkDB
All DBs
Position
3:74323494..74348251
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDAKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactattatgacggtgatatc
ggaaactattactatggacaaggacatccaatgaaacctcataggatccgaatgacccac
aacttgctgctaaattatggcttgtatagaaaaatggaaatttaccgaccccacaaagct
actgctgaggaaatgaccaagtatcatagtgatgagtacatcaaatttctccgatcgata
aggcctgataatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctgtcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaattgggctggaggactt
caccatgccaagaaatcggaggcatctggtttctgttatgtcaatgatattgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccgggcacaggggatcttagggacattggtgctggaaaaggt
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatccaaagtaatggagatgtaccagcccagtgctgtggtatta
cagtgtggagcagattcactgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggaggaggatacactattcgtaatgttgctcgatgctggacgtatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgactactttgagtattttggacca
gacttcaagcttcatattagtccttcaaatatgactaatcagaatacgccagaatatatg
gagaagatcaagcaacgtttatttgaaaacttgcgcatgttacctcacgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcctgtgatgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccaggatagaggaagacaaaaaagagacggaggacaagaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacagatgccaaaggagca
aaatcagaacagctcagcaatccttga
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