Rissa tridactyla (black-legged kittiwake): 128907122
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Entry
128907122 CDS
T09443
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128907122 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128907122 (SRF)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
128907122 (SRF)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
128907122
NCBI-ProteinID:
XP_054051555
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Position
3:complement(9954062..9968929)
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AA seq
546 aa
AA seq
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MLPSQAGAGNGAAAALARGSGLGRSPVPVPRGANGGGAAAGPPGGRLEREALYSGSEGDS
ESAEEEELGGERRGVKRGLAEAAAAAAGPAAGAAAAAYSGGGGGGGGAVSGAKPGKKTRG
RVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKL
QPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDA
LKPAFTVTNLPGTTSTIQTAPTTSTSMQVSSGPSFPITNYLAPVSASISPNAVTSANGTV
LKTTGASAVTSGGLMPIPTGFTLMSGASLSPGTPTIPLTQLQPHSLALSSQQGQVVTGTA
GQLQQAQQTVFRFPARAGGQIVSLTGGTMAQQVPVQAIQVHQAPQQTSPSSDSSTDLTQT
SSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLAVLNAFSQAPSAMQ
VSHGQVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQSSSGSSLTELQVVNLDTS
HSAKSD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgagccaggccggggccgggaacggcgccgccgccgcgctggcccgcggctcc
gggttgggccggtcgccggtaccggtgccgcgtggggcgaacggcggcggggcagcggcg
gggccgcccgggggccgcctggagcgggaggcgttgtacagtggcagcgagggcgactcg
gagtcggccgaggaggaggagctgggcggcgagcggcgcggcgtgaagcgtggcctggcc
gaggcggcggcggcggcggcggggcccgcggcaggagcggcggcggccgcctacagcggc
ggcggcggcgggggcggcggggccgtgagcggcgccaagcccgggaagaagacgcggggc
cgggtgaagatcaagatggagttcatcgacaacaagctgcggcgctacaccaccttcagc
aagaggaagaccggcatcatgaagaaggcctacgagctctccacgctgacgggcactcaa
gtcctgctgctggtggccagcgagacgggccatgtgtacacgtttgccacacggaagctg
cagcccatgatcaccagtgagacggggaaggcgttgatccaaacgtgcctcaactcccca
gactcgcccccgcgctcggaccccaccactgaccagcgcatgagcgccacgggctttgag
gagacggacctcacctaccaggtgtccgagtcggacagcagtggggagaccaaggacgca
ctgaaaccagcgttcactgtcaccaacctgccggggacaacgtccaccatccagaccgcc
cccacgacctcgacctccatgcaggtcagcagtggcccgtcattccccatcactaattac
ctggcgccagtgtctgccagcatcagccccaatgccgtcaccagtgccaacgggacagtg
ctgaagactactggagccagtgcagtgacatctgggggcctcatgccgatacccaccggc
ttcaccctcatgtcaggtgcttccctttctccggggacccctaccattcctctcactcag
ttacagccgcactccctggctctttccagccagcagggccaggtggtcacgggtacggct
ggacagctgcagcaggcacaacagacagtcttccgcttccctgccagagctggagggcag
atcgtgtcgctgacaggtggtaccatggctcagcaggtcccagtccaggccatccaggtg
caccaggcaccgcagcaaacgtctccctctagtgacagcagcactgaccttacccagacc
tcttccagcggaacagtgaccctcccggcgaccatcatgacgtcgtctgtgccaaccact
gtgggtggccacatgatgtaccccagcccacatgcagtgatgtacgcgcccacatctggc
cttgcggacggtggactcgcagtcctcaacgctttttcacaagcgccctcagcgatgcag
gtgtcccacggccaggtccaggatcagggtggcgtcccccaagtgttcctgacagcccca
tcaggcaccgttcagatcccggtctcagctgtccagcttcaccagatggctgtcatcggg
cagcagagcagcagtggcagcagcctgacggagctgcaggtggtcaacttggacacctca
cacagcgccaagagtgactga
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