Rissa tridactyla (black-legged kittiwake): 128907165
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Entry
128907165 CDS
T09443
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128907165 (TARBP1)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128907165 (TARBP1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
128907165 (TARBP1)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128907165 (TARBP1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128907165 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Cut8
RHH_9
Motif
Other DBs
NCBI-GeneID:
128907165
NCBI-ProteinID:
XP_054051617
LinkDB
All DBs
Position
3:44976690..45014653
Genome browser
AA seq
1590 aa
AA seq
DB search
MEVVLADALLAGGGDPCALLRALSAPLCAERAEALRLLLQRLAAAPPPPPGEAESLRRVA
WEVALERCRPLLRGGEAAAAAGGGCGERLRLGRAALGALRHCVELCGPPLAARLARDALA
ELSAGGGAGAEAAVEALVAAAPRLEEPALVAGCVAAALALVREEGEGEGEEAAAALVAGR
LLPALGGNGAALRGVWEGLLGGGGAPRVGRALLALSAMADALLPRGPPGPGSVLDARLCP
RFWRLVQEGLTERDGLCRRRARYLLKRALDLSGGQGGELRCPTDGGDEPSLFWWSAEKSD
KLQQFWESYILIMETLEGNQIHVIKPVLPKLNSLFEHAISGEKGCWLFHPSWHMCIYKRM
FESENKTLTKEGILHFLELYETKHLPNSLGFSEFVIGPLMDALAESSLYSRTPGQLMGAC
PPLGMRLQKFLATYLILLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALAYIPACKVL
GAEGLHALRDVLQCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLAEVSSFLLSLRPEE
SLRRDTMLWMELCSWFKENDGCFRKSIISDFEHQETSSLCQYVRRLVAEYLKTPASEREN
CFMPDWFEAKLVATMILLAADVEQMRNKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYI
PTLKTDKSLQLLLKLLQTRSLKCSNTQDDGVLFFIWKSLVTPVESILEFVLRRLTTNELS
TVGDLDRCDLYLALIPEIVNLCLQVSRKKVPSIKNFILSLTNASIRNLQERNCEEEPKLK
EQIKKVASMASLTAVCEIMDGKPEAHLESLPFVDALKRFISVSQHNEVLKKPSYIEEKSS
LSEEATSQGWGRVVARYVRDQWICLRFILNSFPTLAQEYEETSEMSLSTVERSRKILESA
LEALTILPSDQVSPVFDCMKLLVPKLLDSAESLCIEAFDLAWKIISSLSNTQLIFWSNLK
AFVQFIFDAEVLAVAASGKGQAYAKIKEIIFKLIDMSATKTGVFNVVLSHCCRSWILPTL
KERRALTNAFLSAGNYCELITEACVFGTVFRRDQRLTQDVNAFIENLGEKCAANVVTKST
NRDDHYVRVCAIKFLCLLDGSNTLHKTFMEDIFIKLLDKDELVSRSRTRYYANSLQHRIK
NRVWQTLLVLLPKLDQNFLRGILDKVFQAGFSNNQASVKYFIEWIVILSLHKYPQFLNKF
WDCFCYDEEKLKTSICTFLSVLSHFDIVLQNTSEKKPALKKALIVVLQWCFNHNFSVRLY
ALVALKKIWGMCKMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFH
PVEDYSLETIFYTLPRLSELAEDEWISVAKFDRFTDVHLPPTFQWYRSRTELYDLKPSDW
SQQDMGSNSVETDSQTEWTDVQKKIIPWKNSTPSSDLEMVFQDRAAKLGKSNSRLIVVAS
LIDKPTNLGGLCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDY
LQQKKTEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQ
GIIRSLNVHVSGALLIWEYTRQQVIKQKQK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggccgacgcgctgctggccggcggcggggacccctgcgcgctgctg
cgggccctcagcgcgccgctctgcgccgagcgggcggaggcgctgcgcctcctgctccag
cgcctggcggccgcgccgccgccaccgccgggcgaggccgagtcgctgcggcgggtcgcc
tgggaggtggcgctggagcggtgccggccgctgctgcgcggcggggaggcggcggcggcg
gcgggagggggttgcggggagcggctgcggctggggcgggcggcgctgggggccctgagg
cactgcgtggagctgtgcgggccgccgctggcggcgcggctggcccgcgacgcgctggcg
gagctgtcggcgggcggcggggcgggcgcggaggcggcggtggaggcgctggtggcggcg
gcgccgcggctggaggagccggcgctggtggcgggctgcgtggcggcggcgctggcgctg
gtgcgggaggagggcgagggggaaggggaggaggcggcggctgcgctggtggccgggcgg
ctgctgccggcgctgggtggtaacggggcggccctgcggggcgtctgggaggggctgctg
ggcggcggcggggcgccgcgggtcgggcgggcgctgctggccctcagcgctatggccgac
gcgctgctgccgcggggccctccgggaccagggtcggtgctggacgcccggctgtgcccg
cggttctggcggctggtgcaggagggcctgaccgagcgggacgggctgtgccgcaggagg
gcccgctacctgctgaagcgagccctggacctcagcggcggccagggcggcgagctgcgc
tgccccacggacggcggagacgaaccgagcctgttttggtggtccgctgagaagagtgac
aaactccagcagttttgggaaagttacattttgataatggaaactctggagggaaaccag
atccatgtcataaagccagtattaccaaagctaaacagtttatttgagcatgctatatca
ggggaaaaaggttgttggttgtttcacccgtcatggcacatgtgcatctataaacgaatg
tttgagagtgagaataaaacactgacaaaggaaggcattcttcattttctggagctttat
gaaacaaagcatcttccaaattcacttggtttttcagagtttgttattggaccattaatg
gatgccctcgcagaaagttccctctatagcaggacaccaggtcagttgatgggagcttgt
cctcctttgggaatgaggctacagaagtttttggctacttacctcatccttcttccagag
gaagaaaaaggtagtttcctgttaaaatttattcagaagatgacgagtaggcattggtgt
gctgttcccattttgtttctttctatggctctggcatatatccctgcatgtaaagtactg
ggagctgaaggacttcatgctttaagagatgtcctccagtgtactatgattacacatcag
attttgttgcgcggagctgctcagtgctatcttcttcaaacagctatgcatttgacagat
gtggagaaagtgtccctcgcagaagtttcaagctttcttctgtcccttagaccagaggag
tccctgaggagggatactatgttatggatggagctttgcagttggtttaaagagaatgac
ggatgcttcagaaagtctataatctctgattttgaacatcaagaaacatcatcattatgt
caatatgtacgcaggcttgtggcagagtaccttaagacaccagcatctgaaagagaaaat
tgctttatgcctgactggtttgaagctaagcttgtcgcaacaatgattctgttggctgca
gacgtggaacagatgaggaataaatacagtggaaaaagcaacatagaatggattgaacta
gaggctttcttgaaccctcttctggatgtcttgatgaaacttggcagtaatgcttacata
ccaacactgaaaacagataaaagcctacagcttctcttgaagttattgcagacccgttcg
ttaaaatgttccaatacgcaagatgatggggtattgttttttatctggaaatctctagtg
acacctgtggagagtattcttgaatttgttctccggcggcttactacaaatgagttaagc
actgttggcgatctggatcgttgtgatctatacttagccttaattccagagatagtgaat
ttgtgcttgcaagtcagcaggaagaaagtaccatctatcaagaatttcattttgtccctg
acaaatgcgtctattcgtaatcttcaggagagaaattgtgaagaggagccaaagcttaaa
gaacagattaaaaaagtcgctagcatggcttcacttacagcagtttgtgagataatggat
gggaaacctgaagcgcaccttgaatctctgccttttgtggatgctctgaagagatttatt
tccgtttctcaacataatgaagtattaaagaagccatcttatattgaagaaaaaagtagc
ttatctgaagaagcaacatctcaaggatgggggagagttgttgcacgctatgttcgtgac
cagtggatttgccttcgttttattttaaattcatttccgacactggctcaagagtatgaa
gaaacttcagaaatgtcattatctacagttgaaaggtcaagaaaaattctagagtctgca
ttagaagccctaactattcttccttcagaccaagtttcacctgtgttcgactgcatgaaa
ctccttgttcccaagcttctggactcagcggagtctctctgcatagaagcatttgatttg
gcttggaaaattatttcctctttgagcaacacgcagctaatattttggtccaatctaaaa
gcttttgttcagttcatctttgatgctgaggttctagctgttgccgcaagtggaaagggt
caagcatatgccaaaataaaagagataattttcaagctcatagatatgtccgctacaaag
actggagtcttcaatgtagtcctcagtcattgctgtcgatcttggatattgcccactctt
aaagagagacgtgccttgacaaatgctttcttaagtgctggaaattattgtgaacttatt
actgaggcttgtgtctttggaactgtatttaggagagatcaaagacttactcaggatgtg
aatgccttcatagaaaatcttggagaaaaatgtgcagcaaatgttgttacaaaaagtaca
aatcgagatgatcactacgttcgtgtttgtgctattaaatttctgtgcttgttggatgga
tcgaataccttgcataagacatttatggaagacattttcatcaaactacttgataaagat
gaactggtatccagatcaagaacacgctattatgcaaactctttacagcatagaattaaa
aaccgggtatggcagactctcttagttcttcttccgaagcttgaccagaattttttgcgt
ggaatcctcgacaaagttttccaggctggatttagtaacaatcaggcatctgtgaaatac
ttcatagaatggattgttatcttgagtctacataaatacccccaattccttaataaattc
tgggattgcttttgctatgatgaagagaagcttaaaacgagcatctgcacatttttatca
gtgttatcacactttgacatcgttcttcaaaatacctcagagaagaagccagctttgaag
aaagccctgatagttgttctacagtggtgtttcaaccataatttcagtgttcgactttat
gcattagtggcccttaaaaaaatctggggtatgtgcaaaatgttgcatgtggaagaattt
gaagctctgacaccagttattgaatctagtcttcaacaagtggaaaacatgcatggcaca
gggaatgctagaaggaactggcagcgaatccaagatcatttcttctttgcgacgtttcat
cctgttgaggattacagtttagagacaatattttacactcttccccgcctttcggaactt
gctgaagatgaatggatctcagttgctaaatttgacagattcactgatgttcatttgcca
ccaacatttcagtggtatcgttctcgaacagaactttatgatctgaaaccaagtgactgg
tctcagcaagacatgggttcaaattcagttgaaacagatagccagacagaatggacggat
gttcagaaaaagataataccctggaagaacagtactcctagttcagacctagaaatggta
tttcaggatcgtgctgctaaactcggtaaatcaaacagcagactgattgtggtggcttcg
cttatcgataaacctaccaatttaggaggtttatgtcgtacaagtgaaatatttggggct
tctgcactagttgtcggcagtcttcattacatacaggataagcagtttcagcatctcagt
gtttctgcagagcagtggctcccccttgttgaggtgaaaccttctcagcttgttgattat
ttacagcagaaaaaaacggaaggctacactattattggtgtggagcagacagctaaaagt
tttgatcttacagaatactgcttcccagagaagtcactattattgctgggaaatgaacat
gaaggaatcccagcaaacctgattcaccacctggatgtctgtgtggaaattcctcagcag
ggtattattcgatcactcaacgtccatgtaagtggagctctgctgatttgggagtacaca
aggcaacaagtgatcaagcaaaaacaaaaataa
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