Rissa tridactyla (black-legged kittiwake): 128907257
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Entry
128907257 CDS
T09443
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128907257 (TAF1B)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
128907257 (TAF1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
N6_Mtase
Motif
Other DBs
NCBI-GeneID:
128907257
NCBI-ProteinID:
XP_054051877
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All DBs
Position
3:110332100..110392937
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AA seq
659 aa
AA seq
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MDEEATRDFNERCAQCSEVNWGLTDGGRLYCRSCHNVTERTTDVVNSDFVCNSRIQTISK
GLKKQEKTDGGCEWYVCEGFQLVLKKQAEALEALGVCPQMKDEVLCNFWRRYLQKTKQAY
CNTSAGETVKALSVCDSSTDVDSEPETPSPLQLLSLSESEGDLQTDSSFASSISKVSEST
SVCSGSVDGSLYLMKNRKEKLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVVEGHIPYL
NVFQHFPEKMKLYGLDLKIFRVESWPVYEEVYNKMLELAAFLDLPRFPDITDSCFLHPDM
LCMKYLMEANLPDELHNWTCRVVKKIRIGEADFLTLVPGNKSTRNVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSDFAEERNKNNKEGGPYFEFKKWYKVIKCSLDVKQKKLDEERAKYL
WRCEKVLFYSDKQKSKVLKRRQTAVNLQNQFGKLSGSVLPAEKPNPSSFQLSWSEENTDG
SCFHGHSLKGVLQEKHGLLTVKNPDYWLCTVKLCNEKTCGHLAHYREVDFPQSYHFVIQL
FSFLLRIQPSYIHDEAVLEQLWHCFLRFLASHVSASLLLCLSLSFKLTPFRSIVCLLPVV
LAVALLISCRPCHCLMRKMLKTLSGDVAIRKLDLDPGVLLCCLFMEDTCNAVWRSTARL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggccacgagagattttaatgaacgctgtgcccaatgttcagaagtgaac
tggggtctcactgatggaggcagactttattgcagatcttgccacaatgttactgagaga
actacagacgttgtaaactctgattttgtttgtaattcaagaatccagacaatctccaaa
ggtttaaaaaagcaggaaaaaactgatggaggctgtgaatggtatgtttgtgaaggcttt
cagctcgtactcaagaaacaagctgaagctttagaagcattaggagtatgtccacaaatg
aaggatgaagttttgtgcaatttttggaggcgttaccttcagaagaccaaacaggcatat
tgcaacacatcagctggagaaactgtcaaagcattatcagtatgcgatagcagtactgat
gtggacagtgaaccggagacaccaagccctcttcagttgttgtctctgtctgaaagtgag
ggggatctgcagactgatagcagctttgcctcatcaattagcaaggtctcagaaagcacc
tctgtgtgctctggatcggtagatggtagcttgtatttaatgaagaaccgaaaggagaaa
ctgaggatgacaatgccaatgaccctttcattttgttacatggcgttactctggttgaga
gaaccaatgacattatctgatctcttaaggtttgttgttgaaggtcatattccatatctg
aatgtttttcagcattttccggagaagatgaaattatatggacttgatcttaagatcttt
cgtgtagagtcatggccggtatatgaagaagtatacaacaaaatgcttgagcttgcggcg
tttttagacctgcctcgttttccagatataacagacagctgctttcttcatccagacatg
ttgtgcatgaagtacttgatggaagccaatttacctgatgaattgcataattggacttgt
cgcgtggtgaaaaagatccgtattggagaagcggatttcctgactcttgtgcctggaaat
aagtcaacaagaaacgtgaaatacgatgttcttgctgcagcagttattgtagttgtgctc
aaattattgtttttattagatgatcactatgaatggttactttcagactttgctgaagaa
agaaataaaaataacaaagaaggtggtccgtattttgagttcaaaaagtggtacaaggtt
ataaaatgttccttggatgtgaagcaaaagaaactggatgaagaaagagccaagtatctg
tggagatgtgaaaaggtacttttttattcagacaagcagaaatctaaagttcttaagaga
agacaaacggctgtgaacttacaaaatcagtttggcaagctgtccggttcagtgctacct
gctgaaaagccaaatccttcaagttttcagttaagttggtctgaagaaaacacagatggg
agttgttttcacgggcatagcctgaagggagttttgcaagaaaaacatggtttacttaca
gtcaaaaaccctgactattggctgtgtacagttaaactatgtaatgagaaaacatgtggt
catctggctcattacagagaagtggactttccccagagttaccattttgtaatacagtta
ttctcctttcttctgcggatacagccctcttatatccatgatgaggctgttctggagcaa
ctctggcactgttttctacgtttccttgcatcccatgtatcagccagtctcttgttatgc
ctgagcctctcgttcaagttaacacctttcagaagtattgtgtgtctgctccctgttgtc
ctagcagtggctttgctcatcagctgcagaccctgccattgcctcatgagaaagatgcta
aagacactcagtggcgatgttgcaatccgaaagcttgatctggatcctggggtgcttctg
tgctgcctgttcatggaggacacctgcaatgctgtctggaggagcactgcacgcctctga
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