Rissa tridactyla (black-legged kittiwake): 128907394
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Entry
128907394 CDS
T09443
Symbol
PAPOLG
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128907394 (PAPOLG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128907394 (PAPOLG)
Enzymes [BR:
rtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128907394 (PAPOLG)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128907394 (PAPOLG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
128907394
NCBI-ProteinID:
XP_054052185
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All DBs
Position
3:2313759..2339008
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AA seq
752 aa
AA seq
DB search
MKEMCGTSRLQNQPQRHYGITSPISLAPPKDIDCVQTQKLVEAMRPFGVFEDEEEQNHRL
VVLSKLNNLVKEWISELGESKNLPPSAVANVGGKVFTFGSYKLGVHTKGADIDAVCVAPR
HVERSDFFQSFFEKLKHQEKIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLSMQTVSDNL
DLGDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNALASTLVNKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDP
RVNPSDRYHVMPIITPAYPQQNSTYNVSISTRAVMVEEFKHGLAVTNEILQGKSDWSKLF
EPLNFFQKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNEFITIAHVKPQSFP
GNQELCKQSGYVSMWFLGIVFRKVENAESVNIDLTYVIQSFTDTVYRQASNLNVLKEGMK
IEAAHVKRKHLHYFLPAETLQKRKKQSMSDITQNASGLQCKRTSSDGSCLDSCRDMGSRT
LYNSSSLNKISKSDASTAEIERNAVCHRPSGGNNREKRSHVAVPSVSKGLSIPVIDSQMQ
TTVAVRTSGPSIGYTMPGHNTISQLRACFVQGQHEISGTPITDPKNVAPKRPYSPTSKGS
HSPTSEGCPKKTRDGEKLTGQDSAFKDGGNPEDVRRRSTENGGLGGKPMRIPIINPSRSQ
RLSSKELPDSSSPVPTNSIRIIKRSIKLTLNG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagatgtgcggtacttctaggctgcagaaccagcctcaaaggcactatggaatc
acctctcccattagcttggctcctccaaaggatatagattgtgttcagactcaaaagcta
gttgaagcaatgagaccatttggagtatttgaagatgaggaagaacagaatcacaggctg
gttgttcttagtaaactgaataacttggtcaaagaatggatttcagaacttggtgagagc
aagaatcttcccccttcagcagtagcaaatgtcggtggcaaagtatttacatttggttct
tacaagcttggagtgcacactaaaggtgctgacatagatgctgtttgtgttgctcctaga
catgtcgaaagatcggatttttttcagtcattctttgaaaaactaaaacatcaggagaaa
ataaaaaatctaagagcagttgaagatgcatatgtgccagttgtcaagtttgagtttgat
ggcattgagattgatcttgtgtttgcaaggctgtctatgcaaactgtttctgataacctt
gatcttggagacgactcgcgtctgagaagcctggatataagatgtatacggagcttaaat
ggctgcagagttactgatgaaatactacatctagtgccaaataaagagaacttccggctc
acgctccgtgcaattaaactgtgggcaaaacgtcgtggcatttactccaacatgctggga
tttcttggtggggtttcctgggcaatgctagtagcaagaacatgtcaactctatccaaat
gctttggcttctactcttgttaacaagttcttcttggttttttcaaaatgggaatggcca
aatcctgtattgctgaaacaacctgaagaaagcaatcttaatttaccagtatgggaccct
agggtgaacccatcagacagataccatgtaatgcctatcatcaccccagcctatccacag
cagaactctacgtacaatgtatctatatcaacgcgagcggtaatggtggaggagttcaaa
catggtcttgcagttacaaatgagattctccaaggaaaatcagactggtcaaagctgttt
gaaccactgaacttctttcagaagtacaagcattatattgtgctgactgctagtgcctct
actgaagagcaccacttagagtgggttggccttgttgaatctaaaatccgtgtgctggtt
ggaaacttagagaggaatgaatttataactattgcacatgtaaagccacagtcttttcct
ggcaaccaagaactctgtaaacagagtggatatgtgtcaatgtggtttcttggaatcgta
tttaggaaagtggaaaatgcagaaagtgttaacattgatttaacatacgttatacagtcg
ttcacagatacagtttacaggcaggctagcaacctcaatgtgctaaaggaaggtatgaag
attgaggcagctcatgtgaagagaaagcatctccactattttttgcctgcagaaacctta
cagaaaagaaagaagcaaagcatgtcagatattactcaaaatgctagtgggcttcagtgc
aaaaggacttcttcagatggaagctgtttggacagttgcagggacatgggctccagaaca
ctatataattcatcttcattaaataagatatctaaatcggacgcctctacagcagagata
gaaagaaatgctgtatgccacaggcctagtggtggtaacaatagagagaagagatctcat
gtagctgtgccatcagtgtctaagggactctccattcctgttattgattcacaaatgcag
actacagttgcagtaagaacatcgggaccttcaattggttacaccatgccaggacataac
acaatttctcaactgagagcatgttttgtccaaggacagcatgaaataagcgggacccca
attacagatcctaagaacgttgcacctaaacgaccttattcaccaacctctaaaggaagt
cattcacctacatcagaaggatgccccaaaaaaacaagggatggagaaaagttaactggc
caggattcagcattcaaagatggtggcaatccagaagatgtcaggagaagatctacagaa
aatggtggccttggaggaaaacccatgcggattccaataatcaacccatcaagatcacag
aggctttccagtaaagaactaccggattcttcatctcctgttccaacaaacagtattcgt
attattaaaagatccatcaaacttacccttaatgggtaa
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