Rissa tridactyla (black-legged kittiwake): 128907835
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Entry
128907835 CDS
T09443
Symbol
PCARE
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtd03037
]
128907835 (PCARE)
04812 Cytoskeleton proteins [BR:
rtd04812
]
128907835 (PCARE)
Cilium and associated proteins [BR:
rtd03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128907835 (PCARE)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128907835 (PCARE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
128907835
NCBI-ProteinID:
XP_054053148
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All DBs
Position
3:complement(14204752..14212801)
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AA seq
1298 aa
AA seq
DB search
MGCTPSHSEIANTIARSGLKALNKPKSVLRIDPGDKGIPLLVKGSSCYNIDELHQYGVQG
KDYLREKEDKLSEQDENDNLQLSSNVRSDPQISREDKKIERTATDAEVVMSELIESQKRI
TEAIQIRKQSSCESEASAFIWDDKNESNAKQIPKKGKKQKSHKLAKQGRPSKTKEKSVLA
PCKTEKKVDFPELLVKAHQSAYAYLNPNLSKYETILHMANQTTQTQLFLQQMVSFLLLRF
DEINQLLEEIAYDGENLLKDVGGNLAWPAEKGDLKEHPDLLQQLLQYTVNKMQLLSGTLA
SLTSDALQETCSYLQSAASNLEGKLKAKQSFDERLLRTVRLLEASTVGSSQSHGDDRTLY
SEDSGIGVDNESLKEFSALSQHGGQASCDSCAHGHLSQKHARTVEHMRDGTVSPSTAASH
DCALERHFKDIFYSSMQSREATSCQGGVPEGNSTMPQYVGLTKSRYYSSFQSDSTQEGEL
FKICESTDFPSDDDDDDEGSTLGEDDDNTSLSEMGKDALPRRPLSSPAVTDNTQRQSIKR
TENVDTEEIILKMKDAISEKIKFVPAKSGRKEWIEDESGRAVLTTRPSTATGSQKTIGKQ
RRSRSEESLRSQAEDPTLLELQRTQKELSKRLEMFYGKKDTDNNLEPCKSRTAPYLQDEQ
ITSKSSRKLKSCLSKNFSILPNQDKVPLFMVDQNPALQLDEKRGRKPLRATVPTQQTSGG
KEKESPGAQMLGGSSCAPRQSVKKLIETFSPTDDLVKAAPLRSLGPIKCIRKFGLPVIPP
TVPFQRGLAPLNLKHRISPVEDTNPSNTSGVSSSFPNAFPPAPAAELSKKDTKEETDEDI
ENLPPPPPEMLMDNSFDLSEPEETARIEGNSSEDAKKPTKTEFHAAKRSQVSPKMKASLQ
SIDLLPSKNISSPSTITNKGLRNMGAENEKLQKYPLELNPTNVHIPSQEEILATQRKEAA
DLYKQTHKIIPLQNPSGASKPHSNSSESREPNSPATSVQNQKHGSPDSLRRNEKGSAFAR
RVSPTRTPSPPAEKRLFSPAAHHRHSLQAFSSPQPSSPVMQRKPSPPSSPRMPSPPLQKK
LPSPPPQRKPLSPPTGHKQSSPTPHRLLGSPAYRRDASPPVFASTPSPPTSPSRSYKGPR
AGLDAGDEHQLSSSKKGSNVRSIFCPATSSLFEARPPLVTTKPAAEVTSQPEASPLSQKS
SLLFRQTGDRTRKLSLSAANPQPFVRRSFSDRRPGVQFRLPAPVTAGSEPALNQASLEES
PQKAGDSWNSPCVPEIRESNRSASHPELYVVGHGLQRD
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccttctcacagtgagattgctaatactattgcaagaagtggtcttaag
gctttgaataaacccaaaagtgttttgcgtattgacccaggagataaaggaatccctctg
ctggttaaaggttcatcttgctacaatattgatgaattacaccagtatggagtccagggg
aaagactacctgagagaaaaggaggataaactgtcagagcaggacgaaaatgataatttg
cagttatcttcaaacgttcgttcagacccccaaatttccagggaagacaagaaaattgag
aggacagccacggatgctgaagttgttatgtcagaactgattgagtctcaaaaacgcatc
actgaggccatacagatcaggaagcaaagctcctgtgaatcagaagcatcagctttcatt
tgggatgacaagaatgaaagcaacgcaaagcaaatcccaaagaaagggaagaagcaaaaa
agtcataagctggcaaagcaaggtcgacctagcaaaactaaagaaaagtctgttttggcc
ccgtgcaagacagagaaaaaagtagatttcccagaactgcttgttaaggctcatcagagt
gcgtacgcctacttaaatcccaacctctccaagtatgaaactatacttcacatggccaac
cagactacccaaactcagctcttcctgcagcagatggtaagctttctcctgcttcgcttt
gatgaaatcaaccagctcttggaagaaattgcctatgatggggaaaatcttctcaaagat
gtaggtggcaatctggcatggccagcagaaaaaggtgatttgaaggagcaccctgatctt
ctgcaacaactactgcagtacacggtcaataaaatgcagttactgagtgggacactggcc
tccctcacttctgatgccctgcaggagacgtgcagctacctgcagtctgctgcaagcaac
ttggaaggaaaactgaaagcaaagcaaagctttgatgagcgcctgctacggacagtaagg
ctgcttgaagcctcaacagtgggatcctctcagtcccatggtgatgacaggactctctat
tctgaggatagtggcattggtgtggacaatgaatccctcaaagagttcagtgctctcagc
cagcatggaggacaagcaagctgtgattcctgtgcacatggacatctgtcccaaaagcat
gccagaacagtggagcacatgcgtgatgggacagtgtcaccgagcacagccgcatcccat
gactgtgcacttgaaaggcattttaaagatatattttattcatccatgcagagtagggaa
gcaacttcttgtcagggtggagtaccagaaggcaattctaccatgccccaatatgtaggc
ttgaccaaaagccgttactatagctccttccagtctgactctactcaagaaggtgaactt
ttcaaaatctgtgaatcaacagattttccttctgatgatgatgacgacgatgaagggagc
accctgggggaggatgatgacaacacaagtttatcagaaatggggaaggatgctctgcca
aggaggcccctgtcttcacctgcagtcactgataacacacaaaggcagtccatcaagagg
acggagaatgtagacacagaggaaataattctgaagatgaaagatgccatcagtgaaaaa
atcaagtttgtcccagctaaatctggacgtaaagaatggatagaggatgagagtggaaga
gcagtcctaacaacaaggcccagtacagcaacgggcagccagaaaaccattgggaaacaa
cgacggtccaggtcggaggagtccctcagaagccaggcagaggacccaactctcctagag
cttcagagaactcagaaagagctcagcaaaaggctggaaatgttttatggaaagaaagat
acagataacaacctggagccttgtaaatcaagaacagcaccttatttgcaggatgagcaa
attacatctaagtcctccaggaaactgaagtcatgcctctcaaaaaatttcagcatcctg
cctaaccaggataaagtccctttgttcatggttgatcaaaatcctgcccttcagctggat
gaaaaaaggggcaggaagcctttaagagctactgtgcccacccagcagacatcaggaggc
aaagaaaaggaatctcctggagcacaaatgctcggtggcagcagctgtgcccctcgacag
tctgtcaaaaagcttattgaaactttcagtcccactgatgatcttgtaaaagctgcacct
ttaagatctttaggaccaataaagtgcatcagaaaatttggacttccagtcatcccaccc
accgttcccttccagagaggcctggcacctttaaatcttaagcatcgtatttcaccagta
gaagacacaaacccttcaaacaccagtggagtttcttctagttttccaaatgcctttcct
cctgcaccagctgcagaattaagcaagaaggacacaaaggaagagactgatgaagacatt
gagaacctgccaccaccaccacctgaaatgttaatggacaattcttttgacttatctgag
cctgaagaaactgcaagaatagaaggaaactcttcagaagatgccaaaaaacccaccaaa
acagaatttcatgctgctaagagatcacaagtttccccaaaaatgaaagcctcccttcag
tctattgatctattgccaagtaaaaatattagcagccccagtacgatcactaataaaggt
ctcaggaatatgggagcagagaatgagaaactgcagaagtaccctctggagctgaaccct
accaatgtgcatatccctagccaggaggagatactggcaacccagagaaaagaggctgcg
gatttgtacaagcaaacccataaaattattcctcttcaaaatcccagtggggcttcaaaa
ccacacagtaacagctcagagagcagagagcccaattcacctgcgacttcagtgcaaaac
cagaagcatggttctcctgattcactcaggagaaacgaaaaaggctcagcgtttgccagg
agggtctccccaacaagaactccttctccaccagctgagaaacggcttttcagccccgca
gcacaccacagacactctctgcaggcatttagcagcccgcaaccgagctcacccgtcatg
cagaggaaacccagtcccccctctagccccaggatgcccagcccacccttgcagaagaag
ctgccctctccgccaccccagcgaaaaccactcagccctcccacaggacacaagcaaagc
tcaccaacgccccaccgtctgctgggctccccagcctaccgccgagatgcaagcccccct
gtgttcgccagcaccccctccccaccgacttccccatcccgctcctacaaggggccaaga
gctgggctggatgctggggatgagcaccagctctcctcctccaagaagggcagcaatgtc
cgttcaatattttgcccagccacctcttccttattcgaagccagaccaccactggtaacc
accaaacctgctgcggaggtgaccagccagcctgaagcttcaccactttcccaaaagagc
agtctgcttttccgacagactggagaccggaccagaaagctgtccctgagtgctgccaat
cctcagccattcgtgaggagaagtttctctgaccgccgaccaggggtccagtttcgtctt
ccagctcctgtaacagctggcagtgaaccggcgcttaaccaagcaagcttggaagagagc
cctcagaaagcaggagactcttggaacagcccttgcgtccctgaaatcagagagtccaac
agatctgcttcccaccccgagctctatgtggtgggccatgggctgcagagggactga
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