Rissa tridactyla (black-legged kittiwake): 128907839
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Entry
128907839 CDS
T09443
Symbol
PLCB1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00562
Inositol phosphate metabolism
rtd01100
Metabolic pathways
rtd04020
Calcium signaling pathway
rtd04070
Phosphatidylinositol signaling system
rtd04081
Hormone signaling
rtd04082
Neuroactive ligand signaling
rtd04261
Adrenergic signaling in cardiomyocytes
rtd04270
Vascular smooth muscle contraction
rtd04310
Wnt signaling pathway
rtd04371
Apelin signaling pathway
rtd04540
Gap junction
rtd04621
NOD-like receptor signaling pathway
rtd04912
GnRH signaling pathway
rtd04916
Melanogenesis
Module
rtd_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
128907839 (PLCB1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128907839 (PLCB1)
04371 Apelin signaling pathway
128907839 (PLCB1)
04020 Calcium signaling pathway
128907839 (PLCB1)
04070 Phosphatidylinositol signaling system
128907839 (PLCB1)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128907839 (PLCB1)
04081 Hormone signaling
128907839 (PLCB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
128907839 (PLCB1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128907839 (PLCB1)
09152 Endocrine system
04912 GnRH signaling pathway
128907839 (PLCB1)
04916 Melanogenesis
128907839 (PLCB1)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128907839 (PLCB1)
04270 Vascular smooth muscle contraction
128907839 (PLCB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128907839 (PLCB1)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
128907839 (PLCB1)
Membrane trafficking [BR:
rtd04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128907839 (PLCB1)
Endocytosis
Macropinocytosis
Phospholipase C
128907839 (PLCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
128907839
NCBI-ProteinID:
XP_054053154
LinkDB
All DBs
Position
3:3567087..3965194
Genome browser
AA seq
1219 aa
AA seq
DB search
MAGAQPGVHALQLKPVCVSDNLKKGIKFVKWDDDSTVVTPIILRTDPQGFFFYWTDQNKE
TELLDISLVKDARCGKHARAPKDPKLRELLDAGNLGGRLENRMITVVYGPDLVNISYLNL
VAFQEDIAKEWSDEVFSLATNLLAQNMSRDAFLEKAYTKLKLQVTPEGRIPLKNIYRLFS
ADRKRVETALEACNLPSSRNDSIPQDDFTPDVYRVFLNNLCPRPEIDHIFSEFGAKSKPY
LTVDQMMEFINFKQRDPRLNEILYPPLKQEQVQQLIEKYEPNSNLAKKGQISVDGFMRYL
SGEENGVVPPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRC
VELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPK
QQAKMAEYCRLIFGDALLMDPLEKYPLEPGVPLPSPMDLMYKILVKNKKKSHKSADGSAK
KKLSEQASNTCSDTSSMFEPSSPGAGEAEIESDDDDDYDDDCKKSSMDEGTAGSEAMATE
EMSNLVNYIQPVKFESFEVSKKRNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIY
PKGTRVDSSNYMPQVFWNAGCQMVALNFQTVDLSMQINMGMYEYNGKSGYRLKPEFMRRP
DKHFDPFTESIVDGIVANTLSVKIISGQFLSDKKVGTYVEVDMFGLPVDTRRKALKTKTS
QGNAVNPVWEDETIVFKKVVLPTLACLRLAVYEEGGKFIGHRILPVSAIRPGYHYICLRN
ERNQPLTLPALFVYIEVKDYVPDTYADVIEALSNPIRYVNLMEQRAKQLAALTLEDEEEV
KKEIDHGDAPSEANNEPRPTPAENGVNYTASLTPKPATQVVHSQPTPGSVKAPAKTEDLI
QSVLTEVEAQTIEELKQQKSFVKLQKKHYKEMKDLVKRHHKKTTDLIKEHTAKYNEIQND
YLRRRAGLEKTAKRDSKKRSETGSPDHSSSTIEQELAALDSEMTQKLVELKEKQQQQLLN
LRQEQYYSEKYQKREHIKLLIQKLTDVAEECQNSQLKKLKETCEKEKKELKKKMDKKRQE
KITEAKSKDKNQMEEEKTEMIRSYIQEVVQYIKRLEDAQSKRQEKLVEKHKEIRQQILDE
KPKLQVELDQEYQDKFKRLPLEILEFVQEAMKGKISEDGDHSSAPSSLASDSGKSNHKPL
QSEEELEEENPEKVFDTTF
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggccggggcacagccaggggtgcacgctctccagctcaagcccgtctgcgtctccgac
aacctgaagaaaggcatcaaattcgtcaagtgggacgatgactctactgttgtgactcca
atcattctcagaacggatccgcagggatttttcttttactggacagatcaaaataaggag
actgagctgctagatatcagcctcgtcaaagatgccagatgtggaaaacatgccagagct
cccaaggatccaaaactgcgcgaactgctggatgctgggaaccttggaggtcgactggaa
aatcgaatgataactgttgtctatggtccagatctggtcaatatatcgtacttgaacttg
gtggcattccaagaggatatagcaaaggaatggtcagatgaagtgttcagtttggcaaca
aatttgttggcacagaacatgtcaagggacgcctttctggaaaaagcttacacaaaactt
aagctgcaggtgactccagaagggcgcattcctctgaagaacatataccgcttgttttcc
gctgacagaaaacgggtagagaccgcgttagaagcttgtaaccttccatcttccaggaat
gattcaatccctcaagacgacttcacgccagacgtgtacagggtgttcttaaacaacctc
tgccctcggcctgagatcgaccacatcttttctgagtttggtgccaagagcaaaccatac
cttactgttgatcagatgatggaatttataaattttaagcaacgtgacccacgattaaac
gaaatcctttatccaccgttaaaacaagaacaagtgcaacaactgatcgagaagtatgaa
cccaacagtaatctagcaaagaaaggacagatatcagtggatggatttatgcgatatctg
agtggagaagaaaatggcgtcgttccgcctgagaaactggatttaaatgaagatatgtct
caaccactgtcacactacttcatcaattcctcacacaacacctacctcacagctggacag
ctggccgggaactcatcggtggagatgtatcggcaagtgcttctgtcaggctgccgctgt
gtggagctggactgctggaaaggacgaacagctgaagaagagccagtcattacacacgga
ttcactatgacaacagaaatatccttcaaggaagtaatagaagctattgctgaatgtgca
tttaagacatcaccctttccaatcctcctttcctttgaaaatcatgtggattcccctaaa
caacaggcaaaaatggcagagtactgcagattaatattcggagatgcattgctcatggat
ccattggaaaaatacccgcttgaacctggggttcctcttccaagccctatggatttaatg
tacaaaattctggttaagaataaaaagaagtcgcataagtctgcagatggaagtgcaaaa
aagaagctctcggagcaagcttccaacacatgcagtgatacatctagtatgtttgaacct
tcctcccccggagcaggagaagcagagattgagagcgatgatgatgacgactatgatgat
gactgtaaaaagtcgtcgatggatgaaggtactgctggaagtgaggccatggccacagaa
gagatgtctaacctggtgaactacattcagcctgtgaagtttgagtcatttgaagtatca
aaaaaacgcaacaaaagttttgaaatgtcttcctttgtggaaaccaaagggcttgagcaa
cttacgaagtctcctgtggaatttgtggaatacaacaaaatgcagctaagccgaatttac
ccaaagggaacacgtgtagattcttcaaactacatgccacaagtcttctggaatgctggc
tgccaaatggttgctcttaatttccaaactgtagatttgtctatgcaaataaacatggga
atgtatgagtacaatggcaaaagcggatacaggttaaagccagaattcatgagaagacca
gacaaacactttgatccatttactgaaagtatagtggatggaatagtagctaacaccttg
tctgtcaagataatttcaggtcagtttctttctgataaaaaagtcggtacctatgtagaa
gtggacatgtttggcctgcctgtggatacaagaagaaaagctttgaagaccaagacctct
caaggcaatgcagttaatcctgtctgggaagacgaaaccatagtgtttaagaaggttgtt
ttacctaccctggcatgtttgaggctagcagtgtatgaagaaggagggaaattcattggt
catcgaatattgccagtctcagcaattcgaccaggctatcactacatctgtttgaggaat
gagaggaaccaacctttgacactgccagctctctttgtatacatagaggtcaaagactat
gtacctgatacttacgcagatgtgatcgaggccttatccaatccaatcagatacgtaaac
ttgatggagcagagagctaagcaactggccgcactgactctggaagatgaagaagaggta
aagaaagagattgaccacggagatgcaccatccgaagctaacaatgaaccaaggccaaca
ccagcagaaaatggagtaaattacactgcctctcttacaccgaaaccagcaactcaggtt
gtccatagccaaccaacaccaggttcggtgaaagcacccgcaaagacagaagatcttatt
cagagtgtcctcacagaagtggaagcacagactattgaggagctaaaacaacagaagtct
tttgttaagcttcagaagaagcactacaaggaaatgaaggaccttgtaaagaggcaccac
aagaaaaccactgaccttatcaaagagcacacggcaaagtataatgaaatccagaatgac
tacctgcgacggagagcagggttagaaaaaacagcaaaaagagacagtaagaaaagatct
gaaacgggcagcccagaccacagttcttcaactatcgaacaggaattggctgcgctcgac
tctgaaatgacccagaagctagttgagctgaaggagaagcaacagcagcagctgctaaat
ctccgtcaggagcagtattacagtgaaaagtaccagaaacgagagcacattaagctgctt
attcagaagttgacagacgtagcagaggagtgtcagaacagccagctaaagaaactgaaa
gaaacgtgtgagaaagaaaagaaagaattgaagaaaaaaatggacaagaagaggcaggag
aagatcacagaagcaaagtccaaagataaaaatcaaatggaagaagagaagactgaaatg
attcggtcgtatatccaggaggtcgtgcagtacataaaacggctagaagatgctcagagt
aaaagacaggaaaaacttgtagaaaaacacaaggagattcgtcagcaaatactggatgaa
aagcctaagttgcaggtggaacttgatcaggaatatcaagacaaattcaaaagactgcct
ttggaaattctggagttcgtacaggaagccatgaaagggaaaatcagtgaagatggagac
cacagttctgccccctcttccctggcatctgacagtggaaaatcaaatcataaacctctg
caaagtgaagaggaattggaagaagagaatccggaaaaagtatttgatactactttttaa
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integrated database retrieval system
