Rissa tridactyla (black-legged kittiwake): 128908046
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Entry
128908046 CDS
T09443
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128908046 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128908046 (PAPOLA)
Enzymes [BR:
rtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128908046 (PAPOLA)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128908046 (PAPOLA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
RMD6
DUF4269
Motif
Other DBs
NCBI-GeneID:
128908046
NCBI-ProteinID:
XP_054053487
LinkDB
All DBs
Position
4:56463773..56507715
Genome browser
AA seq
767 aa
AA seq
DB search
MKLKCLYSPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEE
ELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDA
LCVAPRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQ
TIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNI
YSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLN
LPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA
EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHV
NPQSFPAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKM
FEMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTTLNENSLDLSMDSDNSTSVP
SPTSAMKTSPLNSSGSSQGRSSPAPAVTAASVTNTQASEVTVPQINSSESSGGTSNESIP
QTATQPAISPPPKPTISRIVSSAYLLNPSPRTSGNVATKMPSPVTAVKRTSSPHKEESPK
KMKIEEQDEISEDTSCIDLNEDEKMETKEQLETEVNVNSQTETLQTTSLQAPQLNMYGLP
YKLTEPGFALLNCAFKKTPSTDLSDIPALPANPIPVIKNSIKLRLNR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaagtgtctttatagtcccgttacaacccagggatcacaaacacagcaactg
cagaagcattatggcattacctcacctatcagtttagctgcccccaaggagtttgactgc
atgcttacccagaaattaatcgaaaccctaaaaccttatggtgtatttgaagaggaagaa
gaactgcaacgcaggattctaattttgggaaaattaaataacctggtaaaggaatggata
cgggaaatcagtgaaagcaagaatcttccacagtctgtaatagaaaatgttggaggaaaa
atttttacatttggatcctatagattaggggttcatacaaaaggtgctgatattgatgcc
ctgtgtgttgcaccaagacatgttgaaagaagtgattttttcacgtcattttatgaaaaa
ctgaaacaacaagaagaagtaaaagatctgagggctgtcgaagaagcttttgtcccagtt
attaaactttgttttgatggaatagagattgatattttatttgcaagattagcactgcaa
actattcctgaggacttagatctacgagacgatagcctacttaaaaatttagacattaga
tgcatacgaagtcttaatggttgccgggtaaccgatgaaattctgcatctagtaccaaac
attgacaacttcaggttaacactgagagctatcaaactgtgggcaaaacgccacaacatc
tattccaatatactaggtttccttggaggtgtatcctgggctatgctagtagcaagaact
tgccagctttatccaaatgcaatagcatcaactcttgtacataaatttttcttggtattt
tctaaatgggaatggccaaatccagtgctattgaaacagccagaagaatgcaatcttaat
ttgcctgtatgggacccaagggtaaaccccagtgataggtaccatcttatgcctataatt
acaccagcatacccacagcagaactctacctacaatgtgtccgtttccacacggatggtc
atggttgaggaatttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggca
gagtggtccaaactttttgaagctccaaacttctttcaaaagtacaagcattatattgta
cttctagcaagtgcaccgacagaaaaacagcgactagaatgggtgggcttggtggaatca
aaaatccgtattctagttggaaatctggagaagaatgaattcattacactggctcatgtg
aatccacagtcgttcccagcacccaaggagaatcctgacaaggaggaataccgtacaatg
tgggtgattggcttggtgttcaagaaaactgaaaattctgaaaatttaagtgttgatctt
acctacgacattcagtcttttacagacacagtttataggcaagcaataaacagcaagatg
tttgagatggatatgaagattgctgcaaggcatgtgaaacgtaagcaacttcaccaactg
ctaccgaatcatgtgcttcagaaaaagaaaaagcattcgacagaagggatcaggttgaca
actctgaatgagaacagcctagacttgtctatggacagtgataacagcacgtctgtgcct
tcgcctactagtgctatgaagacgagtccattgaacagttctggaagttctcagggcaga
agcagtcctgcgccagctgtaacagcagcatctgtgaccaacacacaggcttctgaagtc
actgtgccacaaataaattccagtgaaagctcagggggtacttcaaatgaaagcattcct
caaactgccacacaaccagccatttctccaccaccaaagcctaccatctctagaatcgtt
tcctcagcgtatctattaaatccatcaccaagaacttcaggaaatgttgcaacaaaaatg
cctagccctgtcacagcagtgaaaaggacgtcttctccccataaagaagagtctcccaag
aaaatgaaaattgaagagcaggatgaaataagtgaagatactagctgtatagatttgaat
gaggatgaaaaaatggaaactaaggagcaacttgagacagaagtgaatgttaattctcaa
acagaaactcttcagacaacttctctgcaagctcctcagctaaacatgtatggcttgcca
tacaaactgactgaacctggattcgctcttctgaattgtgccttcaaaaaaacacccagt
acagacctttcagatatccctgctctccctgcaaatcctattcctgttatcaagaattca
ataaaattgagattgaaccggtaa
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