Rissa tridactyla (black-legged kittiwake): 128908075
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Entry
128908075 CDS
T09443
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128908075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128908075
03036 Chromosome and associated proteins [BR:
rtd03036
]
128908075
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128908075
Coactivators
SAGA/TFTC/STAGA complex
128908075
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128908075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
128908075
NCBI-ProteinID:
XP_054053591
LinkDB
All DBs
Position
4:complement(83748080..83891065)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSAPSQQQQPQQ
QQQGSLAGGSSPVRQQQGHPAPPPAAGAEEAAGCPGAAESRAPAQGPLPSPSPPAAAAAA
AAVAAAAAAGRGASVNSSSVQQSHGAALLSGGGSPAAPAPPQPAAPPPQPVNNHVAAAAA
ARDAGSPSPAGSPPAASAPPQRAEAAAGSGTPAEGVSTAAASTAPLPGEAAPNGEGAGGR
PAAVPPVSSQGRPDTAAAPGKPAHGPLPAVNALSNSASPAPAPPGQASAANGAPPAAPPP
AAAAPKAPVGPGKAGAAPPAAPQALSPRPALGAAPRLVAPQLIVRPPQQTTIQLPPGFTI
PPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPTSISPRLSVPTTGPVFRLSTTQ
QPTSVATSTVRLGLPVQAKVVQSTATPVSATSAAALPGGSVLSHTTVSVATTSAQNLFKT
TVATGTSASQQPAVITGGQTQGSAQSQGQPRLPLPPHTTAQVPAQPQVIPSSPVPGTTVV
SQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQSEL
KSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSLQQTKLSQVIPQSASGSISAV
VTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRTPACQTTQ
IRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGSFRDDDDIND
VASMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILETAKKLGITDVPA
EVVTFISHATQNRLRTVIEKVTVITQHRMESYKDDEWYEQATDVRSQLKFFEQLERLEKQ
RKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRK
KRKLDSPGLLTIGGEGLAVSGGGQAGVGTPSSRQYARQKITRVNLRDFIFYMEQERETSH
SLLLYRALLK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgatctggtgggctccttggaatcgcagctggccggcggccggggc
tccgccgaggcgccccagcccaggacctccgccccgtcccagcagcagcagccgcagcag
caacagcaggggagcctcgcggggggcagcagccccgtccggcagcagcaagggcatccc
gcgcctcctcccgctgccggggcagaggaggcggcgggctgccccggagccgcggagagc
cgagcccctgcccaggggccgctcccctccccgtcccccccggcagcggcggcagcagcg
gcggcggtggcggcagcggcggcggcagggaggggagcgagtgtaaacagtagtagtgtg
cagcaatcacatggagcggctctcctcagcggcggcggcagccccgccgcccctgccccg
ccgcagcccgccgcccccccgccccagcctgtcaacaaccatgtggccgctgccgccgcc
gcccgggacgcggggagccccagccccgccggcagcccgcccgccgccagcgcaccgccg
cagcgcgccgaggccgcggcggggagcgggaccccggccgagggggtctccaccgccgcc
gccagcaccgcgccgctccccggcgaggcggcgcccaacggggagggcgccgggggccgg
ccggcggcggtcccaccagtcagcagccagggccggcccgacaccgcagcggcgcccggc
aagcccgcgcacggcccgctccccgcagtaaacgcactcagtaactccgccagccccgcg
cccgccccgccgggacaggcctcggccgccaacggcgccccgccggccgcccccccgccg
gccgccgctgcccccaaggcgccggtgggcccgggcaaggcgggcgctgccccccccgcc
gccccccaggccctctcgccccggccggcgctgggcgcggccccccggctggtggccccc
cagctgatcgtgcggccgccgcaacagaccaccatccagctgccccccggcttcaccatc
ccgcccggtatggtgctggtgcgcacggatgctggacagcttgtgatggtgcctcagcag
gctctagcgcaggctcaaatgcaggctcaagtacaaacacagggacaaggtcctaccagc
atttcaccgaggctttcggtgcccacaaccggccctgtttttcgcctatcaacaactcag
caaccaacttctgtagccacatctactgtccgcctgggacttccagtgcaagccaaagtt
gtccagtcaactgccacaccagtcagcgctacgtctgccgcggcgctgccgggaggctct
gttctctctcacaccaccgtatcagtagctacgacgagcgctcaaaatttattcaagaca
acagtagcaactggaacatcagcttctcaacaacctgcagtgattactggtggacagact
caaggttcagcacaaagccagggtcagcctcggctgccgcttccgcctcatacgacagcc
caagtaccagcacagccccaggtcataccaagctctccggtacctggaaccaccgttgta
tcacaggaaatgcaagagaatgtgaaaaaatgcaaaaactttttagctacccttataaaa
cttgcttctcataactcaccgtctccagaaacgtcccgtaatgtgaaagctctggttcag
gatttgttggatgcaaagattgatccagaagaatttacaggccgccttcaatcggaactc
aaatcatctcctcagccatatcttgtacctttccttaagaaaagtctacctgcattgaga
caatctttactgaatagtcaacattcagttttgcaaggacagccgtctcagcagtcgctt
caacaaaccaagctatcacaagttatacctcaatctgcctctggaagcatttccgctgtt
gtcacaacgcagacaataggaataaggcaaccaaacaacatttgcacagtctctgtatca
aatacagtgcagcctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcag
attatccagtcaacatctgctcaaactgtgaaacgaacccctgcttgccagactacccag
attaggatgccagtggtaataactcagaccattagaccacaaggcacagtagggaaggca
ccaacaatacaagccagcaaaagtcctgggggctttggtgttcaggtctctgcaaatcag
aaaaacaagctgaatgaccctggaggtggttctttcagagatgatgatgacattaatgat
gttgcctctatggctggcgttaatcttaatgaagaaagtgcccgaattatggctaccaac
tctgacttggttggaacccagatacagtcctgtaaagatgaaccctttcttgctgctata
cctctacataaacgcatacttgaaacggctaaaaaactaggaattactgatgtgccagcc
gaggtggttacttttatttcccatgcaacacaaaacagattaagaacggtgatagaaaaa
gtgaccgtgataacccagcaccgaatggaatcgtacaaagatgatgaatggtatgaacaa
gctacagacgtccgatcacaattaaagttttttgagcagttggagcgtttagaaaagcaa
aggaaagatgaacaagagagggaaatcttgctaaaggccgccaagagtcgctcaaggcaa
gaagacccagagcaagctagactgaaacaaaaagcaaaggagatgcagcaacaagaactt
gcacaaatgcggcagagggatgccaatctaactgcgctggcagctatcggtccccggaag
aaacggaagcttgattcgcctggactgctcaccataggaggagagggcctcgctgtgtcc
ggcggcggccaggccggcgtggggacgccttcctccaggcagtacgcacgacagaaaata
actcgcgtaaacctcagggacttcatcttctacatggaacaggagcgagaaacgagccat
tctctcctgctctatcgagctctgcttaaataa
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