Rissa tridactyla (black-legged kittiwake): 128908166
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Entry
128908166 CDS
T09443
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128908166 (SAMD4A)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128908166 (SAMD4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
128908166
NCBI-ProteinID:
XP_054053778
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All DBs
Position
4:70820666..70922765
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AA seq
734 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRLSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGNQGRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGISVSASSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTIL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRVPLQELHQMILTPIKAYSS
QNSSTEEHSRDADSHHPSSLLGSDSQGSDCKDSAAGGMQQHHLPGCEGESGGAPLPEGDL
PGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTEIQKKRLLSWKQQVQKLF
RSFPRKSLLELSGYRQQRSRGFGQSNSLPTAGSAGAGLGRRNPRQFQIPSRNLPTARLGL
LGPSGLLGTPQRSPAASPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHTSPQ
TMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALSGEHSLLLGLFQHVHTASTEPPGTC
PCPVPPKSWDRLWL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagaccaggtcggcgtcttggccgggtggttcaagggctggaacgagtgc
gagcagactgttgcgctgctctccctgctcaaacgcctcagccggacccaggctcgcttc
ctccagctctgcctggagcattccctggcagactgcaccgagctccacatcctcgaaggg
gaagccaacaaccctggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctattgttaacccacctgcctttactgaagcccggaaacatcgaggcaaaagtcgaa
tacatgaaactcttgcctaaaatcctggcccactcgatcgaacacaaccaacatatcgag
gagagcaggcagctgctgtcctacgccttgatacaccctgccacctccttagaggacagg
agcgccctggccatgtggctcaaccacctggaggaccgcacgtcgggtggcttcggcaac
cagggcagaggtcggtcggattcggtggactacgggcagacgcactactatcaccaaaga
caaaactccgacgacaaactcaacggatggcaaaactctcgagactcgggcataagcgtc
agcgcttccagctggcaggacaaaaacctggcctgcgagaacggccatctgcccctctac
tcctcctcctccgtccccacaaccatcaacaccatcggcactagcacaagcaccattctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttccgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttccgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccagcctggctgaagagcctccggctgcacaagtac
gccgcccttttctcgcagatgacgtacgaggagatgatggccctcaccgaatgccaactc
gaggcacaaaacgttaccaaaggcgcaagacacaaaatagtcatcagtatccaaaagcta
aaagaaagacaaaacctgctcaaatctttagaaagggacatcctggaaggtggcaacttg
cgtgtcccgctgcaggaactacaccaaatgatcctcacccccatcaaagcctactcttcc
caaaactccagcacggaggagcacagccgggatgcagactcgcatcacccctcctcgctg
ctcggctcggacagccaaggctctgactgcaaggactctgcagcgggggggatgcagcag
caccatttgccaggatgcgagggcgagtcggggggggcccctttgcccgaaggtgacctt
cccggacagttcaccagagtgatgggcaaagtatgcacgcaacttttagtttcccgaccc
gacgaagagaatataagttcctatttacagctcatagacaaatgtctgatccacgaggcg
tttacagagattcagaagaagcggctgctgtcatggaaacagcaggtgcagaaactcttt
cggtccttccctcggaaatccctcctggagctgtcaggctaccgtcagcagaggagccga
ggctttggccagtcgaactccttaccgacagccggatctgcaggggcgggactgggccgg
cgaaacccccgccagttccagatcccctcccgcaacctccccaccgcccggctggggctg
ctgggccccagtgggctgctgggcaccccgcagcgcagccccgccgccagccccgccatc
ctcaagcaaggcagacagaacctctggtttgccaaccccgggggcagcaacagcatgccc
agccggagccacagctcggtgcagaggacacgctcgctgcccgtccacacctccccgcag
accatgctgatgtttcagcagccagagttccaggtgccggtgactgaacctgacatcaac
aacaggctggagtccctgtgcctgagcatgacggagcacgcgctcagcggtgagcactcc
ctcctcctcgggctcttccagcacgtccacaccgcctccaccgagccccccggcacctgc
ccctgccctgtgcccccaaaaagctgggacaggctgtggctgtga
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