Rissa tridactyla (black-legged kittiwake): 128908265
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Entry
128908265 CDS
T09443
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128908265 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128908265 (DIS3)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
128908265 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
DUF7325
ASPRs
Motif
Other DBs
NCBI-GeneID:
128908265
NCBI-ProteinID:
XP_054054071
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All DBs
Position
1:complement(47278744..47301416)
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AA seq
965 aa
AA seq
DB search
MLTSRTFLKRTRAGAVVKVVREHYLREDIPCGAAHCRLCPPRAADGPPAATGLQARPSGA
ASSLCPGPHYLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIQN
PEKHFYSFTNEHHRETYIEQKQGETSNDRNDRAIRVAVKWYNDHLKKIEDEKNIQVIFLT
NDKTNKEKALEEGITAYTCEEYIKSLTANPDLLDRLACVSDEGKEIESGKIIFPEHVPLS
KLQQGIKSGIYLQGTYRASRDNYLEATVWVHGDTEENKEIIIQGLKHLNRAVHEDIVAVE
LLAKDEWVAPSSVVLQDDGQNEDDIEKEEEKESILKTSVNKDMLRPTGRVVGIIKRNWRP
FCGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNGH
FVKNLGSAGDKETETEVLLLEHDVPHQPFSQGVLKFLPKMPWSITEQDMKYREDLRHLYV
CSVDPPGCTDIDDALHCREVENGNIEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEK
RIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQM
RIDSATMNDEITTSLRGLNKLAKILKKRRIDNGALTLSSPEVRFHMDSETHDPIDLQTKE
LKETNSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKDLEIKT
DSAKALAESLDKAESPTFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTHF
TSPIRRYADIIVHRLLAVAIGADSTYPDLLDKHKLADMCKNLNYRHKMAQYAQRASVAFH
TQLFFKNKGVVNEDAYILFVRKNAVVVLIPKYGLEGTVFFEEKGKPTPRLDYNNEVPSLT
VEDTTLHVFDKVKVNIMLDASNIQHQKIRMVLVEPKIPGNDAPANLPTEINSKNEPEKKK
KKLQK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggaccttcctgaagcgcacgcgggcgggggcggtggtgaaggtggtg
cgcgagcactacctgcgcgaggacatcccctgcggcgccgcccactgccgcctctgtccc
ccccgcgccgccgacggcccccccgccgccaccggcctgcaggcacggcccagcggcgcc
gccagcagcctctgccccggcccgcactacctcctgcccgacaccaacctcctcctgcac
cagattgatatacttgaagatcctgtgattaagaatgtcattgtgctacagacagtcttg
caagaagtcaggaatcggagtgcaccagtatacaagcgaattagggacgtgattcaaaac
cctgaaaagcatttctattcgttcaccaatgaacatcatagagagacatacatagaacaa
aagcaaggagaaacttctaatgaccgcaatgacagagccattcgggtagcagtaaaatgg
tacaatgaccacttgaagaaaatagaggatgagaagaatattcaagttatctttttaacg
aatgacaaaactaataaagagaaagctctagaggaagggataactgcttatacgtgtgag
gagtatataaaaagcttgacagctaatcctgatcttctagatcgtcttgcttgtgtatct
gatgaagggaaagaaatagaaagcggaaaaataattttcccagaacatgttcctcttagc
aagttgcagcaagggataaaatctggtatttacctccaaggaacttatagggcaagcaga
gataattatcttgaagctactgtttgggttcatggagatactgaagaaaacaaagagata
attatacagggactgaaacatttaaatcgagcagttcatgaagatattgtagctgtggaa
ctattggcaaaagatgaatgggtggcaccgtcctcagtggtcttgcaagatgatggccag
aatgaagatgacattgaaaaggaagaggagaaagaaagcattctgaaaacttctgttaac
aaggacatgctgagacctacaggaagagtagtgggcattataaaacgaaactggcgacca
ttctgtggcatgctttccaaatcacagatcaaagaggcaaggcggcatttgtttacacca
gctgatcgcagaattcctcgcattcgaatagaaacaagacaagcagatacactggaagga
caaagaataattgttgctattgatggttggcccaggaattccaggtatcctaatggtcat
tttgtaaagaacttgggaagtgctggagataaagagaccgagactgaagttcttctgctt
gagcatgatgtccctcatcagcctttttcccagggtgtccttaaattcctaccaaaaatg
ccatggagcattacagaacaggatatgaaatacagggaagacttaaggcatctatatgtt
tgtagtgttgatcctcccggctgtacagatattgatgatgcattgcattgtagagaagta
gaaaatggaaatatagaggttggtgtacatattgcagatgtcagtcattttattcgccca
ggaaatgctttggatgaggagtcagcgaaaagaggaacaacagtgtatctgtgtgaaaaa
aggattgatatggttccagagttactcagttccaatttgtgctccctgagatctaatgtg
gacaggcttgcattttcatgtatatgggagatgaaccataaggctgaaattctaaaaacc
agatttacgaagagtattattaattccaaggcttctcttacgtatgccgaagcacagatg
agaattgattcagcaactatgaatgatgaaatcactaccagcctacggggactaaacaaa
ttagcaaaaattctgaagaagagaagaattgataatggagccttgacactttcctcacca
gaagttcgtttccacatggacagtgaaactcacgatcccattgatctgcagactaaggaa
ctcaaagaaacaaattccatggttgaagagttcatgttgcttgccaatgtctctgtggca
caaaaaatttacgatgagttcccagagtttgccttgctccggaaacaccctgctcctccc
ccatcgaattatgacatccttgtgaaggccgcaaagtccaaggatttggaaattaagaca
gattcagctaaggctttggctgaatcattagacaaagctgaatctcctacgttcccctat
ctaaatacactgctgcgaattttgaccactcgctgcatgatgcaagctgtttatttctgc
tctggaatggataatgattttcatcactacggtttagcctcacctatttatacccacttt
acctcacctattagaaggtatgctgacatcatagtacatcgacttttggcagtggccata
ggagcagacagtacttaccccgatcttttagataaacataaactagcagatatgtgtaaa
aatctcaattaccgacataaaatggctcaatacgcacaaagagcatctgttgcattccat
acacagctgttcttcaaaaacaaaggagtagtgaatgaagatgcatatatattatttgta
agaaaaaatgcagttgtggttctgattcccaagtatgggttagaaggaactgtcttcttt
gaagaaaaaggtaaaccaacaccgagactggattacaacaatgaggtgccgtcacttact
gtggaagacacaacgttacatgtatttgataaagttaaagtgaacattatgttagacgct
tccaacatccaacatcagaaaattcggatggtgttagtagaaccaaagataccaggaaat
gatgcgcctgcaaatctacctacagagataaacagcaagaatgaacccgagaaaaagaaa
aagaagctacaaaaatag
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