Rissa tridactyla (black-legged kittiwake): 128908492
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Entry
128908492 CDS
T09443
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04520
Adherens junction
rtd04530
Tight junction
rtd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128908492 (ACTN1)
04520 Adherens junction
128908492 (ACTN1)
04530 Tight junction
128908492 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128908492 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128908492 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128908492 (ACTN1)
04147 Exosome [BR:
rtd04147
]
128908492 (ACTN1)
Membrane trafficking [BR:
rtd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128908492 (ACTN1)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128908492 (ACTN1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128908492 (ACTN1)
Exosomal proteins of colorectal cancer cells
128908492 (ACTN1)
Exosomal proteins of bladder cancer cells
128908492 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
128908492
NCBI-ProteinID:
XP_054054779
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All DBs
Position
4:complement(40893135..40985426)
Genome browser
AA seq
892 aa
AA seq
DB search
MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI
NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatcactacgacccgcagcagaccaacgactacatgcagccggaggaggactgggac
cgggacctgctcctcgacccggcctgggagaagcagcagaggaagacgtttacagcatgg
tgtaactctcacctccgcaaggctgggacacagattgagaacatagaggaagatttcagg
gatggcctcaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct
gaaagaggcaaaatgcgagtgcacaaaatatccaacgtgaacaaggccttggatttcatt
gccagcaaaggagtcaaattagtatctattggagcagaagaaatcgtggatggcaatgtt
aaaatgactcttggaatgatctggaccatcatccttcgttttgccattcaggatatctca
gttgaagagacatctgctaaagaaggacttttgttatggtgtcagaggaagacagccccc
tacaaaaatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgc
gctttaattcatagacaccgtccagagctcatcgactacgggaagctacgaaaggatgat
cctctcactaatctaaacacagcttttgatgtggctgagaaatacctggatattcccaag
atgctggatgcagaagacattgttggaactgcccgtcctgacgagaaagccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cgtatctgcaaggtgctggcagtcaaccaagaaaacgaacagctcatggaagactacgaa
aaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaaccgg
gccccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactaccgt
cgcctgcacaagccccccaaggtccaagagaagtgccaacttgaaatcaatttcaacacc
ttgcagaccaagctgcggctcagcaacaggccggccttcatgccttcagaagggaaaatg
gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctatgaggag
tggttgttgaatgagatccggaggctagagaggctggatcacctggcagagaagttccgg
cagaaagcatccattcatgagtcctggacagatggtaaggaagcaatgctgcagcagaag
gattacgaaactgctaccctctcggagataaaggccctgctgaagaaacacgaggccttt
gagagcgacctggctgcacaccaggaccgcgtggaacagattgctgctattgcacaagag
ctgaatgagctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgt
gatcagtgggataatctgggtgccctaacccagaaacgtagagaagccttggagagaaca
gagaagctactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcccct
ttcaataactggatggaaggggccatggaggacctgcaggacacgttcattgttcacacc
attgaggagatccagggattgaccacagcccacgaacagttcaaagccactttgccagat
gccgacaaggagcgacaggccattctgggaatccacaatgaagtctcaaagattgtccag
acataccatgtcaacatggcaggaacgaatccttacactacgatcacgccacacgagatc
aatggcaaatgggaacatgtgcggcaactggttcccagaagggatcaagccctgatggaa
gaacatgctcgccagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat
gtcatcggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatg
catgggaccctggaggaccagctcaaccacttgcggcagtatgagaaaagcattgtgaat
tacaaaccaaagattgaccagttggaaggagaccaccaacagatccaggaagcgcttatc
tttgacaacaagcacaccaactacaccatggagcatatccgagtgggctgggagcagtta
ctaacaacaattgctagaaccatcaatgaagtggaaaaccagattctgacccgtgatgcc
aaaggaatcagccaggaacaaatgaacgagttccgggcttctttcaaccatttcgacagg
gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac
gatattggaaacgatgcacagggagaggcagagtttgcccgcattatgagcatcgttgac
cctaaccgtttgggtgtagtgacgttccaggccttcatcgacttcatgtcccgggaaaca
gcagatacagataccgctgaccaggttatggcttcctttaagatcctggctggagataag
aactacatcactgtggatgaattacggcgggagctgcctcctgatcaggctgaatactgc
attgctcgaatggcaccctacaatggccgtgatgctgtacccggtgcgctggactacatg
tccttctccacggcgctctacggcgaaagtgacctttaa
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