Rissa tridactyla (black-legged kittiwake): 128908493
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Entry
128908493 CDS
T09443
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128908493 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128908493 (SF3B3)
03041 Spliceosome [BR:
rtd03041
]
128908493 (SF3B3)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128908493 (SF3B3)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
128908493 (SF3B3)
Spliceosome [BR:
rtd03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
128908493 (SF3B3)
Complex B
128908493 (SF3B3)
Complex C
U2 SnRNP specific factors
128908493 (SF3B3)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
128908493 (SF3B3)
TFTC complex
128908493 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
128908493
NCBI-ProteinID:
XP_054054782
LinkDB
All DBs
Position
4:complement(73354873..73385342)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctacaacctgacgttgcagcgagccaccggcattagctatgccatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtgtcccggggcaagatcctggagttg
ctccgccccgatcccaacacggggaaggttcacaccctgctgaccgtggaagtgttcgga
gtcattcgctccctcatggcctttaggctgacgggtggcaccaaagactatatcgtcgtg
ggcagcgattcggggcgcattgttattctggagtaccagccctcaaagaacgtgtttgag
aagattcatcaggaaacctttggcaaaagtggatgtcgcagaattgttccaggccagtac
ttggctgtagacccaaagggccgcgccgtcatgatcagtgcgattgaaaagcagaagctg
gtgtatatcttgaacagggatgctgctgctcgtctcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacgggagaagca
gcagccaacacacaacagaccttgacgttttatgaactggacttgggtttgaaccacgtt
gttaggaaatacagtgagcccttggaagagcacggcaacttccttataacagttcctggt
ggttctgatggacctagcggggtgctgatctgttctgaaaactatattacttacaaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagcgaggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcggctgaagtactttgacacagttcctgtcgctgctgccatgtgc
gtgctgaagacggggtttctctttgtggcatctgagttcggaaaccattacctgtaccag
atagctcacctgggtgacgatgacgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacgttcttttttcagccacgacctctcaagaacctggtgttggtggatgag
ctggacagtttgtctcctattctgtgttgtcagatagcggatttggccaatgaagacaca
ccccagttgtatgtggcttgtggtcgggggccccggtcatctctgagggttctaaggcat
ggacttgaggtttctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctatatcatcgtgtccttcgtaaat
gccaccctggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacacctaccttgtcctgctctcttcttggtgatgatgctttggtgcaggtttat
ccagatgggatccggcacatccgagcagataagagagtaaatgaatggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtatacagagaga
aaggagatgtcggccgacgtcgtttgcatgagcctggccaatgttccccctggggagcag
cgctcccggttcctcgctgttgggctggtggacaacactgtcagaattatttcccttgac
ccttcagattgcttacagccgctgagtatgcaggcccttcctgcccagcccgagtcgctg
tgcattgtggagatgggtggcacagagaagcaggacgagctgggggagaggggctccatt
ggctttctgtacttgaacattggactgcagaatggtgtactgctgcgaactgtcctggat
cctgttactggcgacctttccgataccaggaccagataccttggctcgcggcctgtgaaa
ctcttccgagtgcgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg
ctcagttattcctatcagtcgcgtttccacctgactcccttgtcttatgagacactggag
tttgcgtctggttttgcttctgagcagtgcccagagggcattgtagccatctccacaaac
acattgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatt
gagacagaccacaacgcttacactgaggccaccaaggcacagagaaagcagcaaatggct
gaggaaatggtggaggctgcgggtgaagatgagagggagttggctgcagagatggctgca
gcgtttctgaacgagaatcttcctgagtccatctttggtgctcccaaggcagggaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggcaacacattagatctggtc
cagctagagcagaacgaagctgccttcagcgtggctgtgtgccgcttctccaataccggt
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcggtt
gctgggggatttgtctacacgtacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcccgcagccattgctccgttccaaggtagagtctta
attggagttggaaagctcttgcgcgtttatgacctgggcaagaagaaactgcttcggaag
tgcgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg
attgtttcagacgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag
ctcatcatctttgctgatgacacttacccccggtgggtcactacagcaactctcctggat
tatgacactgtggctggagcagacaagtttggcaacatctgtgtggtgagattgcctccc
aacaccaacgatgaggtagatgaggatcccacaggcaacaaagcgctctgggacaggggg
cttcttaacggagcatcacagaaggctgaagtgattatgaattaccacgtgggagagacg
gtgctttccttgcagaagaccacgctgatcccaggaggctctgaatctcttgtctatacc
accttgtcaggggggataggaatcttggtcccttttacttcccacgaggatcacgacttc
ttccagcatgtggaaatgcacttacggtctgagcaccctcctctctgtggacgagaccat
ctcagtttccgctcctactacttcccggtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggccgaagagctggatcggacc
ccacccgaggtgtccaagaagctggaagacatccgcacgcgctacgctttctga
DBGET
integrated database retrieval system
