Rissa tridactyla (black-legged kittiwake): 128908507
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Entry
128908507 CDS
T09443
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128908507 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtd01007
]
128908507 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128908507 (KARS1)
Enzymes [BR:
rtd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
128908507 (KARS1)
Amino acid related enzymes [BR:
rtd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128908507 (KARS1)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128908507 (KARS1)
Prokaryotic type
Other AARSs
128908507 (KARS1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
128908507
NCBI-ProteinID:
XP_054054819
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All DBs
Position
4:94688061..94697223
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AA seq
600 aa
AA seq
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MLSPTAARLRGWVWRAAPALRWRRALHDRSSELKRRLKAERKTAEKEAKQKEQSEKQSNK
LSVTSDSENNIAADEESLDPNQYYKIRSNAVQQLKGTNEDPYPHKFHVDISLTDFIEKYS
HLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRIN
NKLRRGDIIGVEGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLD
LILNDYVRQKFITRAKIITYIRSFLDELGFLEIETPMMNVIPGGAVARPFITYHNELDMN
LYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEI
TEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVDDLEKVLGVKFPPAEC
FETEETRKFFDDLCAERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLA
KWHRSRPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENF
CMALEYGLPPTAGWGMGIDRFTMFLTDSNNIKEVLLFPAMKPEDNKKEAQPDPPAEGTSV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccctaccgccgcgcggctccgcggctgggtctggagggctgcgcccgccctc
cggtggcgccgggcacttcacgaccgaagcagtgagctgaagagacgtttaaaggctgag
agaaaaacagctgagaaagaggcaaagcagaaggagcaaagtgaaaagcaatcaaacaag
ctttctgtgacttctgactccgagaataatattgctgctgatgaagaaagcttggatccg
aaccaatattacaagatccgtagcaatgcagtccagcagctgaagggcaccaatgaagat
ccctatccccacaagttccatgtagacatatctctgacagattttatagagaagtacagt
cacctacagccaggagatcacctgacagacattacagtgagagtggcaggtcgaatccat
gcaaaacgtgcctctggagggaagctgattttctatgatcttcgtggtgaaggagtcaag
ttgcaggtcatggcaaattccaggctctacaaatccgaggaagagtatttccgtattaac
aacaagctgcgtcgtggggacattattggtgtagaggggaatcctgggaaaacaaagaaa
ggggaactgagtattattccttatgaaataactctgttgtccccatgcctgcacatgttg
cctcatcttcactttggcctcaaagataaggaaactaggtatcgtcagagatacttggat
ttaattcttaatgattacgtgaggcagaaatttataacccgtgcgaagatcattacatat
attcggagctttctggatgagttgggcttccttgagattgaaactcctatgatgaatgta
attccaggtggagctgtggcaagaccttttatcacataccacaatgaactggatatgaat
ttatacatgagaattgctccagagctttaccataagatgttggtggttggaggcatggac
agagtatatgaaattgggcgtcagttccgtaatgaaggcattgatttgactcacaaccct
gagttcacaacttgtgaattctatatggcttatgcagactaccatgacttgatggaaatt
acagagaaattgctttcagggatggtgaaacatattactggaagttacaagatcacttac
catccagatggtcaagatggacaggcctatgagatagattttactcctcccttccgacga
attagcatggtggatgatctggaaaaggtcctaggagtgaaattcccaccagctgagtgt
tttgaaactgaagaaactcggaagttctttgatgacctttgtgcagagagaaatgttgag
tgtccgcctcccaggacaacagccaggcttcttgacaaattagttggtgaattcctggaa
gtcacatgtatcaaccctacattcatttgcgatcacccacagatcatgagtcctctagcc
aaatggcatcgctctcgtccaggactaacagaacgtttcgaactctttgtaatgaagaag
gaagtgtgcaatgcatacacagaacttaatgatccttttcgtcagcggcagctttttgag
gatcaggccaaggcaaaagctgcaggtgatgatgaagccatgtttattgatgaaaacttc
tgtatggctctggagtacggccttcctcctacagccggctggggcatgggaattgatcgc
ttcaccatgttccttacagactccaataacatcaaggaggtgcttctcttccctgccatg
aagccggaggacaataagaaggaggcgcagcccgacccgcccgccgaaggcacctcagtg
tga
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