Rissa tridactyla (black-legged kittiwake): 128908517
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Entry
128908517 CDS
T09443
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128908517 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtd03037
]
128908517 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128908517 (RPGRIP1L)
Cilium and associated proteins [BR:
rtd03037
]
Primary cilia and associated proteins
MKS complex
128908517 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
128908517
NCBI-ProteinID:
XP_054054849
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All DBs
Position
4:76919037..76998151
Genome browser
AA seq
1276 aa
AA seq
DB search
MSVPADETVGDLPVRDVGLTLAGTGGLQESSTPQNVRARQSVSRISRGELEDRFLRLRDE
NILLKQHANKQEEKIKRMATKLIRLVNDKKRSEQVGGGPKRLGQAVELEEMIEHLQERVR
ELEKQNESLRSKLISTKQQLQIQGHRPCPYSYVQSRIDTGLKKVSEAAGMPEHAKKGIRI
HEFQDLEVRSPNLALPRYGQILLEDPRAEIRNLETVIESQREHIEELEHAKEILVSRLRK
KGKEIEESALRLKKQETTSQRLNIRDNVEMIKVRKQLVEKSNALSAMEGKLLHLQENQKN
LKMSHDALIAKGDELNLQLKEERLKCLHLEKELQSVTISNQRTEELQERINDLEKEKELL
KENYDKLYNSVFSMTHEQQWMLKEQQLKLQIAELETAIKSDLADKNEILEKIKAERDEKE
KLMQENKDLQLCYLENKQQLDELKNHMKFLTKENDTDVAELSEALLHIKVQKQKKNGDLM
FLEKVEDDIHKDLEHSMWELQLTHAETVQELEKTRNMLIVQHKINKDYQTEVEAVTQKME
HLQKDYELKLEQYVHLLDIRAARIRKLEAQLRDIVYGTKPHKTRPEILPGDPGDEFDETL
HLERGENLFEIHIGRVIFSSGAMHAFGDHEPATFCTYAFYDFELQITPVVYGRTASYDFT
SQYLVQADDCFLHYIQQNSITLEVHHAYGTDYETVAACQLKFHEILENNGKIHSTANLVG
IKENIQNYGTVEYWIRLRVPMDQAINLYKERSKALGYLTSNFREREQSSQQQILRTAQVS
TSTDGNLNELHITIKCCNNLQSRKKHLQPNPYVVYKFFDFADHDTPIIPSSNNPQVDDHM
CFQVPMNADLDRYLKSESLTFYVFDDGETEEGAYVGKANVPLISLAHDRSISGTFELTDP
ERRATGTITVELKWKFVYLPLSGATVAEDLGNYIQNEKSMATKLLAEEKTQTSALSPPFT
SSVTKPTPKPRKRVAQAEKKVSFPDLSTIQMAGSVVENNMELAQNMKASRVPSVSEHVAY
EVKQERLADGKVEEMAEEIQPEKEDLSHLSEGQLADQSSLTSGDETEVAEELEPEDQDYR
QENDAIESIITDSDDCIVSSPVSKNIKQATEKIRIEIISFGLTESRIASDATIQQLFVEC
RLYNFLAEETPLSLPKPTSGQRIHYNYSNVIYVDKANNRARREYLKSMLLKPDLHTDSLR
FTVVSDPPEDEQDLECEDIGFAYVSLREIFQKQRDIIEQDIDVFDSQDDSAVIGKLKVSV
EALNALRSVYEECKDD
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcccagctgatgaaactgtgggggacctgcctgtgagagatgtaggtctaact
ctagctggaactggaggattgcaagaatcatcaactccacagaatgttagagctcgacaa
tctgtatcacgaatcagtcgaggggaactggaagacagatttcttcgtttacgtgatgag
aacatcttactcaaacagcatgcaaataagcaagaggagaaaattaaaagaatggccacc
aagttaatacggcttgttaatgataaaaaaaggtctgaacaggttggtggcggccccaag
cggctgggtcaggctgtggagctggaagaaatgattgagcatttgcaagagagagttcgt
gagcttgagaaacaaaacgagagcctccgcagcaaactcatttcaactaaacagcagctc
cagattcaaggccataggccttgtccgtacagctatgttcaatctcgtattgacactggt
ctcaaaaaagtgagtgaggctgctggcatgccggagcacgcaaagaaaggaattagaatt
catgaatttcaggatttagaagtgagatcacctaaccttgcgctcccaagatatggacag
attctgcttgaggatccacgagctgaaataagaaatttggagactgtgattgagtcccaa
agggaacacattgaggaactagaacacgccaaagagatacttgtgagtcggctgagaaag
aaaggaaaggaaattgaagaatctgccctacggctgaaaaagcaagaaacaacaagccaa
aggctaaacattcgagacaatgtggaaatgatcaaggtccggaaacagctagttgaaaaa
agcaatgctctttcggcaatggaaggaaaacttctccaccttcaagagaaccaaaagaac
ttgaagatgagccatgatgctttaatagcaaaaggtgacgaactgaacctacagcttaaa
gaggagcggttaaagtgcctccatcttgaaaaagaattgcagtcagtgactatttcaaac
caaaggacagaggagttacaggaaagaataaatgacctagaaaaagagaaggaactcttg
aaggaaaactatgataaactgtataacagtgtcttcagtatgacccatgaacagcaatgg
atgttaaaggaacagcaactgaaactgcaaattgctgaactagagactgctatcaagtct
gatttagcagacaaaaatgaaatccttgagaagatcaaagcagaaagagacgaaaaggaa
aagctgatgcaagagaacaaagacctgcagttatgctacctggaaaataagcaacaacta
gatgaactgaaaaatcacatgaagtttttgaccaaggaaaatgatactgatgtggcagaa
ctcagtgaagccctcttgcatataaaggttcaaaagcagaagaagaacggggaccttatg
tttttggaaaaagtagaagatgatatccataaagacttagaacactccatgtgggagctg
caattaacacatgcagaaacagtgcaagaacttgaaaagacaaggaatatgttaattgtg
cagcacaaaattaacaaagattaccagactgaagtagaagcagtgacacaaaagatggag
catctacagaaagactatgagttaaaactggaacagtatgtccatcttcttgatattaga
gctgcacgcatcagaaaactagaagcacaactaagagatattgtctatggtacaaaacca
cataaaaccagaccggaaatactgccaggtgacccaggggatgaatttgatgaaacatta
catttagaaagaggagagaacctttttgaaattcatatcggcagagtgatcttctcttct
ggagctatgcatgcctttggtgaccatgaacctgcaactttttgtacttatgcattctat
gactttgaactacagataaccccagtagtttatgggcgtaccgcatcatacgacttcact
tcccagtatcttgtgcaggctgatgactgcttcttgcactatatacagcaaaacagtatc
acacttgaggttcatcatgcgtatggcacagattatgaaacagttgctgcgtgtcaactg
aagttccatgaaatcctggaaaacaatgggaagatccacagcacagcaaatttagttgga
atcaaagaaaacattcaaaattatggtacagtagaatactggatcaggttacgagttcct
atggatcaagctattaatctctacaaagagaggtcaaaggctctggggtacctaacatcc
aattttagggaacgtgaacaatcatcccagcagcagatactcagaactgcccaagtcagc
acttcaacagatggcaatttaaatgagctccacattacaataaaatgttgtaacaatcta
caatcccgaaaaaaacatcttcagccaaatccttatgttgtctacaagttctttgatttt
gcagaccatgatactcccatcattcctagcagcaacaacccacaagtagatgaccatatg
tgtttccaagtgccaatgaatgcagatttagaccgatacctaaaatcagaatccttaacc
ttttatgtatttgatgatggtgaaacagaagaaggtgcttacgtagggaaagcaaatgtg
cctcttatttctctagcgcatgacagatctatctcaggtacttttgaactaacagatcct
gaaagacgtgctactggtaccatcacagtagaattaaaatggaagtttgtctacctgcca
ctaagtggagcaacggtggctgaagacttaggaaattacattcaaaatgagaaatcaatg
gcaactaaattactagcagaggaaaaaacgcagacttcagccctgtctcctccttttact
tcatcagtgacaaaaccaacacccaaaccaaggaagcgtgtagctcaagcagagaagaaa
gtatcttttccagatcttagtacaatacagatggcaggctctgttgttgaaaataacatg
gaacttgcacagaacatgaaggcttcaagagttccaagtgtttcagagcatgtggcatat
gaggttaaacaagaaaggctagcagatggtaaggtggaggagatggctgaagaaattcaa
ccagaaaaagaagacctctcacatctgtcagagggccagttggctgaccaaagctcactt
acctctggagacgagacagaagtagctgaagaattggaaccagaagatcaagattataga
caagaaaatgatgccatagaatcaataataactgacagcgatgactgtattgtttcaagt
ccagtatccaagaatattaaacaggcaactgaaaaaatccggattgaaattatatcattc
ggtcttactgagtcacgaattgcatcagatgcaacaatacagcagctgtttgtagaatgc
agattatacaatttccttgcagaggagaccccactgtcacttccaaaaccaacaagtggg
cagaggattcactataactacagcaatgtgatatatgtggataaagcaaataatcgtgca
aggagagagtatctcaagtcgatgcttctaaagccagatctacatactgacagcctacga
tttacagtggtcagtgatcccccagaagatgaacaggatcttgaatgtgaagacatcggt
ttcgcttatgtcagtttgagagagatattccagaagcaaagagatatcattgagcaagat
attgatgttttcgattcgcaagatgatagtgcagtaattggaaagctcaaagtatcagtg
gaagccctcaatgcgctgcgttcagtctatgaggaatgcaaagatgactag
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