Rissa tridactyla (black-legged kittiwake): 128908614
Help
Entry
128908614 CDS
T09443
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128908614 (PNN)
03015 mRNA surveillance pathway
128908614 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128908614 (PNN)
03041 Spliceosome [BR:
rtd03041
]
128908614 (PNN)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128908614 (PNN)
Spliceosome [BR:
rtd03041
]
Complex C
Other components
EJC/TREX
128908614 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
128908614
NCBI-ProteinID:
XP_054055231
LinkDB
All DBs
Position
4:complement(29900279..29910937)
Genome browser
AA seq
693 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLAITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDGEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATEKQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLMEESQKKMNAIFESRRNEFAEQINKMEARPRRQSVKEKEQQEVQN
EEKKEEQNKEQEEGKVVQQVEELETGNQHNDVEMEEAGEEKGKIGSGHSDAEKEQEEDEQ
KHEMEIKVEETTEVRENDKQEDGQHEEVTVVKEESENIQPVDNEQDVAEMNEADSVEPVE
NENGKEVEPETECDAQTEKACSDPSPEKEKGIKAEIEAEPEEKQEKAPEAQPEPVAEALS
QPQSVPLPQSPQLSQATQDTEPPADKDENAVVSVKVVEAQTEQSQAPSVEIKSKTRSRSR
GRAGNKTGKSHSRSSSSSSSSSTSSSTTSGSSSSTGSSSSRSSSTSSSTTSGSTSRDTSS
SSSTSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSSR
SDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaggccaaggagagcctcaag
cacgtggacgagaatatccgcaagctcacgggacgggaccccaatgacgtgaggccccct
caaaacagactgctagccatcacaggccctggtggaggtagagggcgtgggagcttattg
ctgaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggggcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacggagaggatgatgatattaaaaagccagcgttgccatcttctgttgtggctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcacacttcaaaaatttaagcaggagtcc
acagttgctactgagaagcaaaagagacgacaagaaattgaacaaaaacttgaagtgcag
gcagaggaagaaagaaagcaagttgaaaacgaaaggcgagaactatttgaagaaagacgt
gctaaacagacagagctgcggttactggagcaaaaggttgagcttgctcagttgcaagaa
gaatggaatgaacataacgctaaaataattaaatacataagaacgaagacaaaaccccat
ttattctacatacctggcagaatgtgtcctgctacacagaagctgatggaagagtcacag
aaaaagatgaatgcaatctttgaaagcaggcgaaatgaatttgcagagcagataaacaaa
atggaggccaggcccagaagacaatctgtgaaggaaaaagaacagcaggaggtgcagaat
gaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggttcagcaggtg
gaagagttggagacaggtaatcagcacaatgatgtagaaatggaggaggcaggggaggaa
aagggaaaaataggttcagggcatagcgatgcagagaaagaacaggaagaggatgaacag
aaacatgaaatggagattaaagtagaagagactactgaggtgagggagaatgacaagcaa
gaggatggtcagcatgaagaggtcactgtagtaaaagaggaaagtgaaaacattcagcca
gtggataatgagcaggatgtggctgaaatgaatgaggcagatagtgtagaacctgtagaa
aatgaaaatggcaaagaagtggaaccagaaacagagtgtgatgctcaaacagagaaagca
tgtagtgatccttctcccgagaaggagaaaggaattaaagcagaaattgaagctgaacct
gaagaaaaacaggagaaggcacctgaagctcagccagaacctgtggctgaggctctttct
cagccacagtctgtgccgctgccacagtcacctcagttgtctcaggccactcaggataca
gagcccccggcagacaaggatgaaaatgctgtggtgtctgtaaaggtggttgaggcacag
acagagcagagtcaggcaccgagtgtagaaattaagagtaagactaggagtagaagcagg
ggtagggcagggaacaaaactggtaagagtcatagccgtagtagcagcagcagtagcagc
agtagtacttcaagcagcactactagtggaagtagttccagcactggcagcagtagcagt
cggagtagttccaccagcagcagcactacaagtggaagtactagcagggacactagtagc
agtagctctaccagtagtgaaagtcgaagtcgaagccgaggaagagggcataacagagat
agaaaacgcagaaggagcacggacaggaagcgaagggatgcttcaggagtagatagaagt
cacaagtcctcaaaaggtggtagcagagataccaaaagctcaaaggataaaagttcaaga
tctgacagaaagaggtctatttcagaaagtagtcggtcaggcaagagaacttcacggagt
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
