Rissa tridactyla (black-legged kittiwake): 128908728
Help
Entry
128908728 CDS
T09443
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128908728 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128908728 (VPS35)
Membrane trafficking [BR:
rtd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
128908728 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
128908728
NCBI-ProteinID:
XP_054055442
LinkDB
All DBs
Position
4:80310814..80340553
Genome browser
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaagccatt
caggctgtgaaggtgcagtctttccagatgaagagatgcttggacaaaaacaagctcatg
gatgctctgaaacatgcttccaacatgcttggtgagctgcggacgtccatgttatctcca
aagagctattatgagctctatatggcaatttctgatgagttacactacttggaagtctat
ctgacagatgaatttgccaaaggaaggaaagtggcagacctttatgagctagtacagtat
gctggaaatattattccaagactgtatctcctgataacagtaggtgttgtctatgtcaag
tcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagta
cagcatcctcttagaggcctctttcttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgattcgatg
gattttgtgctgctgaactttgctgagatgaacaaactttgggtgcgaatgcaacaccag
ggccatagtcgggacagagagaaaagggaacgagaaaggcaggaactgagaatcctagta
ggaacaaacctggttcgcctcagtcagttggaaggtgttaatgtggagcgatacaagcag
attgttctgcctggaatattggagcaagttgtaaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gatatcaaactgtttgacatcttttcacagcaggttgctactgttatacagtctcgccag
gacatgccctcagaggatgtggtatctttgcaagtttctctcattaacttggctatgaaa
tgctacccggaccgtgttgactatgttgataaggtgttggagacaactgtggaaatattc
aataaacttaatctggaacatattgcaacaagcagtgccgtttcaaaggagctgactaga
cttttgaaaatccctgttgatacttacaacaatatcctgacagttctgaaactaaaacat
ttccacccactctttgaatactttgattacgagtccaggaagagcatgagttgttacgtg
cttagcaatgtattggattataacacagaaattgtgtcccaagaacaggttgatgctatc
atgaatttggtatccacgctgatccaggatcaaccggatcagcctgctgaagaccctgac
cctgaggactttgctgacgagcagagccttgtgggaagatttattcatcttttgcgttca
gatgaccctgaccaacagtatctgatcctaaacactgcccggaaacactttggtgcgggt
gggaaccaacgcattcgttttacgctgccaccattggtttttgctgcataccagcttgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcgtttgctcatcagaccatcagtgctctgatcaaagcagaactggcagagctgcct
ctccggctcttcctacaaggagcactggctgcaggagagattggctttgagaatcatgaa
actgtggcctatgaattcatgtcccaggccttctctctctatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaataaccttgataattgggacatttgagaggatgaaatgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcgctggcagcctctaagctc
cttaagaagccagaccaatgtcgggctgtgagcacctgtgcccatctgttttggtctggc
cgaaatactgacaagaatggagaggagcttcatggaggaaaaagagtgatggaatgccta
aagaaggctttgaagatagcaaatcagtgcatggacccttctctgcaagtccagcttttc
atagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagataagagaagatctcccaaaccttgagtctact
gaagaaacagaacaaattaacaaacactttcacaacacactggaacacttgcgtctgagg
agggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttag
DBGET
integrated database retrieval system
