Rissa tridactyla (black-legged kittiwake): 128908771
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Entry
128908771 CDS
T09443
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128908771 (IRX5)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128908771 (IRX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
128908771
NCBI-ProteinID:
XP_054055572
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Position
4:complement(76113564..76117080)
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AA seq
473 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTGAADPKAAPGCERLQESPSPRE
AEGSLSDSDCKEPAEERLDGPPAPHKPPGSSPLGPCPPGRGLPPASGEEPPPYRPPSAAA
GPPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPA
VLGGGGPSRSPPRPRSPAAPCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGP
AAAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctactcctgc
ccggcgtacagcaccagcgtgatctctggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggctccctgggctaccac
ccgtacgcggcgccgctcggttcctacccctacggggaccccgcgtaccgcaagaacgca
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaacgcgcggcggcggctcaaaaaggagaataaaatgacctggacc
ccgcggaaccgcagtgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccccgggacgccggacacaggagcg
gcggatcccaaggcagcgccgggctgcgagcgcctccaggagtcccccagcccccgggag
gccgagggcagcctcagcgactcggattgcaaagagccggcggaggagcggctcgacggg
ccgccagccccccacaagccgcccggctcttccccgctggggccgtgcccgccgggccgc
gggctgccgccggcgagcggcgaggagcccccgccgtaccgtccgccctctgccgccgcc
gggccgccgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctccgtc
atccactcgccgcagcaggcggccctcgccaagcccaagctctggtcgctggccgagatc
gccacctcggcggacaaggcgaaggaggccggcggcgaggcggcgccccccggccccgcc
gtgctgggcggcggcggaccatcgcgctcgccgccgcggccgcgctcgccggcggctccg
tgccccttccccaacggggcggtcctgccgcggccgctctactacacggcgccgttctac
cccggttacacgaactacggctcattcggggccctgcacgggcaccccgccggcggcccc
gccgccgccgcccccggcgcccacttcaatggattaaaccagactgtcctcagcagagcc
gagagcctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaa
gactcaccttacgaactgaagaaaggtatgtccaacatttaa
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