Rissa tridactyla (black-legged kittiwake): 128908831
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Entry
128908831 CDS
T09443
Symbol
CD44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128908831 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128908831 (CD44)
04090 CD molecules [BR:
rtd04090
]
128908831 (CD44)
00535 Proteoglycans [BR:
rtd00535
]
128908831 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
rtd00536
]
128908831 (CD44)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128908831 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
128908831 (CD44)
Exosomal proteins of colorectal cancer cells
128908831 (CD44)
Exosomal proteins of bladder cancer cells
128908831 (CD44)
CD molecules [BR:
rtd04090
]
Proteins
128908831 (CD44)
Proteoglycans [BR:
rtd00535
]
Cell surface proteoglycans
Others
128908831 (CD44)
Glycosaminoglycan binding proteins [BR:
rtd00536
]
Hyaluronan
Cell surface receptors
128908831 (CD44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
BSH_Fcp1
Motif
Other DBs
NCBI-GeneID:
128908831
NCBI-ProteinID:
XP_054055696
LinkDB
All DBs
Position
4:complement(52243482..52304785)
Genome browser
AA seq
646 aa
AA seq
DB search
MTSLSLWATIGLCLLKLCLAETQFNVSCRYGGVFHVEKNGRYSLTRSEAVELCRALNSTL
STLEQLKKAHELGFETCRYGFVVGHIVIPRINPYHLCAANHTGVYKLSVNTTGRYDAYCY
NATETRDKACEPIESLDTSFLNNQGEIVIDNADGSRYNADGTRHSGESSTSGADDENVGS
GSTHDTTPMDTSIGKSSSSYYGSATPVSQLPDHSSGGGEKEIPRKDADDEVSPVSPDIPL
VTAADNSPAKDGGQYPASTTLVTSENGDRQGPTQHPLLHSDHYGWISQEHNPATTTGSTE
QREFTVAGENDIEKESSHTATASSHGAKQNDSAQDPLVYPGWDKGEDYATQPAVTDRIIP
SRENNHQKESSTTAVASSGRDHHEDPTQPSLPSDNEPGQGTEGITHSRDAPGDEVLTRTT
ASTNKAGDDSPLTSTSKNNGSYTFLMPESVDDVNREKATKEPLAPATPSGSESEQGNTTD
SSHVSWIPGVFPGIEDRLNQLQTSLPTRSTSSIYGNEGPHKGHYESTTFPGETTTTKIVS
QQRSAQVPEWLIIVAALVALALILAVCIAVNSRRRCGQKKKLVINNGKGAVEDRKTSGLN
GDASKSQEMVHLVHKEPSTDPTGACDEFLTVNETQNHQELDMKSGV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcttgtccttatgggcgactattggattatgtttgctgaagctttgtctagca
gaaacgcaattcaatgtaagttgcagatatggaggagtttttcatgttgagaaaaacggt
cgttacagtctcacacgatcagaagcagtcgaactttgtagagctctcaatagtaccttg
tcaacactagagcagttgaagaaagctcatgaacttggatttgaaacttgcaggtatggt
tttgtagtggggcatattgttatcccacgaatcaatccctatcatctttgtgcagcaaat
cacactggcgtttacaaactttcagtgaacacaactggtcggtatgatgcatactgttac
aatgcaacagaaacgagggacaaagcatgcgagccaattgaaagcctagatacttctttc
ctcaataatcagggtgaaatagtcattgacaatgcagatggctcacgttacaatgcagat
ggcacacgtcatagcggagagtcctcaacctcaggtgcagatgatgaaaacgtaggtagt
ggatcaacacatgacacaactcccatggatacctccattgggaaatccagctcctcatat
tatggaagtgctactccagtctcacagctgccagatcattcttctggagggggtgaaaaa
gaaattcctaggaaagatgctgatgacgaagtttctcctgtatcacctgacatccctttg
gtgacagcagctgataattctcctgcaaaagatggtggacaatatcctgcgagtactaca
ctggttacaagtgaaaatggagaccgtcaaggaccaacccaacatccactattgcacagt
gatcattatggatggatcagtcaagaacataatcctgcaactaccactgggagtactgaa
caacgtgaatttactgttgcaggtgaaaatgatattgaaaaggaatcttctcatacagct
acggcctccagccatggggccaaacagaacgactcagcacaagacccattggtgtatcca
ggttgggacaagggagaggattatgccacacaacctgctgtaacggatagaattattcct
tccagagagaataatcatcaaaaagagtcttccactacagctgttgcctcttctggacgt
gaccaccatgaagacccgactcagccatctctgccttcagataatgaaccgggacagggc
actgaaggcatcacgcattccagagatgcccctggggatgaggtcctcaccaggaccaca
gctagtacaaacaaagctggtgatgactctcctctgacgagtaccagtaagaataacgga
tcatacacatttctcatgcctgagtccgtggatgatgttaaccgagagaaagcaaccaag
gaaccactggcacctgccactccatctggaagtgaaagtgaacaaggaaacaccacagat
agttcccatgtcagttggatacctggagttttcccaggcattgaagatcgtcttaaccaa
ttgcagacctctcttcctactagatctacctccagtatatatggtaatgaaggaccacac
aagggacattatgaatccactactttccccggagagaccaccacaacaaaaatagtttca
caacaaaggtcagcccaggtaccagaatggctgatcatagttgctgctcttgtggcactt
gcgttgattcttgcagtgtgcattgctgttaacagtcggagaagatgtgggcagaagaaa
aagctcgtgattaacaatggtaaaggggcagtggaggacaggaagacgagtggattaaat
ggagatgccagcaaatcacaagaaatggtgcacttggttcataaagaaccatcaactgac
ccaacaggagcatgtgatgaattcctgaccgttaatgaaacacaaaatcatcaggagctt
gacatgaagagtggagtgtaa
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