Rissa tridactyla (black-legged kittiwake): 128908873
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Entry
128908873 CDS
T09443
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128908873 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128908873 (CAPN3)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
128908873 (CAPN3)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C2: calpain family
128908873 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
128908873
NCBI-ProteinID:
XP_054055790
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All DBs
Position
4:complement(44043459..44075435)
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AA seq
811 aa
AA seq
DB search
MPTAINAAVAQQTGAGSVPSATISTTTEGAGGGTGGIYSAIISRNQPIIRVKEKTYEELH
KKCLEKNILYEDPDFPPNESSLFYSQKIPIKFEWKRPREICENPRFIIGGANRTDICQGE
LGDCWFLAAIACLTLNKKLLCRVIPHDQSFIQNYAGIFHFQFWRYGDWVDVVIDDCLPTY
NNQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAP
KDIYKIMKHAIDRGSLMASSIDDNLGFSYGSAPRSDIGELISRMVKNLENAQMTHPTVDY
QGTDERPAWTIVPMQYETRMSCGLVKGHAYSVTAVEETTFKGKKIRLVRLRNPWGQVEWN
GPWSDKSEEWNFVNEAEKIRLQHKIVEDGEFWISFEDFMRHFTKLEICNLTPDTLEADKL
QTWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDEEVICSFLVALMQ
KNRRKERKLGANLYTIGFAIYEVPKEMHGTKHHLQKDFFLYNASKARSKTYINMREISER
FRLPPSEYVVIPSTYEPHQEGEFILRVFSEKRSLSEEVENMIEAERPSKKKKGKPIIFVS
DRANSNKELTADEDAGKDGEKTHVDEKKRPSAKAREGSEEEKQFRNIFRQIAGDDMEINA
EELRNVLNNVVKKHKDLKTEGFELESCRSMIALMDTDGSGKINFDEFRHLWDKIKSWQKI
FKRYDTDHSGTINSYEMRNAVNDAGFRLNNQLYDIITMRYADKNMNIDFDSFICCFVRLD
AMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgccataaatgcagcagtggctcagcagacaggtgctgggtcggttcccagc
gctactattagcactacaactgaaggtgcgggtgggggcacgggggggatttattctgcc
attataagtcgcaaccagcccattatcagagtgaaggagaagacctatgaagagcttcac
aagaagtgcctggagaaaaacattctctatgaagatcctgatttcccaccgaatgaatcc
tccctcttctacagccagaaaatccctatcaagttcgaatggaaaagaccacgtgaaatc
tgtgagaatccacggtttatcatcggtggagccaacagaacagatatctgccaaggagaa
ttaggtgactgctggttcctagctgccattgcctgcctgacactgaataaaaaactcctc
tgcagagtcataccacatgaccagtcctttatacaaaactatgctggcatctttcacttc
cagttctggcgctatggagactgggtggacgttgtcatcgatgactgcttacccacatac
aacaaccagctggtctttaccaagtcctcccagcgcaacgagttctggagtgccctcctg
gaaaaggcctacgcaaaactccatgggtcatacgaagctttgaaaggaggcaacactacc
gaagctatggaggacttcaccggaggagtcaccgagttctatgagataaaggatgcccct
aaagatatctataaaatcatgaaacatgccattgacagaggatccctcatggccagctcc
attgatgataacctaggcttttcctatggatcagctcctcggagcgacatcggggaactg
atttctcgaatggtgaagaatctagaaaacgctcagatgactcaccctactgtagactac
caagggacagacgagaggccagcctggaccatagtgccaatgcagtatgaaacccggatg
tcttgcgggcttgtcaaaggtcatgcctattctgtcactgctgtggaagagacaacattt
aaagggaaaaaaatacgtctggtaaggctgagaaacccctgggggcaggtggaatggaat
ggaccttggagtgacaagtcagaagagtggaactttgttaacgaagcagagaaaattcgc
ctgcagcacaagatcgtggaggatggggagttctggatatcatttgaagatttcatgagg
cacttcacaaaacttgagatctgtaacctcacacctgatactctggaagcagataaactc
cagacctggactgtgtcagtcaacgaagggcgctgggtgagaggctgctcagctggaggc
tgccgcaattatccagatacgttttggaccaatccccagtatcgcctgaagctcctggag
gaagatgatgatcctgaggatgaagaggttatctgcagcttcctcgttgcactgatgcag
aaaaataggaggaaagaacgcaagctgggagccaacctgtacaccattggctttgccatc
tacgaggtgcccaaagagatgcatggtactaagcaccacttgcaaaaggattttttcctc
tacaatgcctccaaagctagaagtaagacctatattaacatgcgagaaatctctgagcgc
ttccggttacctcccagcgagtatgtcgtcatcccatcaacatacgaaccccaccaggag
ggagaattcatcctgagggtcttctcagagaaaagaagtctttcagaggaggttgaaaac
atgattgaggcagagcgtccatcgaagaagaaaaagggcaagcctatcatctttgtttcc
gacagagcaaacagcaataaggagctgacagcagatgaagatgctggcaaagacggtgaa
aaaacccatgtagatgagaaaaagcgcccttcagcaaaagctcgtgaagggagtgaagag
gaaaaacagttcaggaatattttccgacagatcgcaggggatgacatggagatcaatgct
gaagaactcaggaatgttctcaataatgtcgtaaaaaaacataaggacttaaagacagaa
ggatttgaactggaatcctgccgcagcatgattgctttaatggatacagatggctcaggg
aagataaacttcgatgagtttcgacacctctgggacaagattaaaagctggcagaaaatt
ttcaagcgttatgacacagatcattcgggaaccattaacagctacgagatgcgcaatgca
gtcaatgatgcagggttccggctgaacaaccagctctacgacatcatcaccatgcgctac
gccgacaagaacatgaacatcgactttgacagcttcatctgctgctttgtgcgcctggac
gccatgttcagagcattccacgcctttgataaagatggagatggcatcattaagctcaat
gtcctggagtggcttcagctcacaatgtacgcgtaa
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